FFCP PHASE1:Hg19::chr3:24206603..24206613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7068 | |EntrezGene=7068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11799 | |HGNC=11799 | ||
|TSSclassifier=strong | |||
|UniProt=P10828 | |UniProt=P10828 | ||
|association_with_transcript=336bp_to_X74497_5end | |association_with_transcript=336bp_to_X74497_5end | ||
|cluster_id=chr3:24206603..24206613,- | |||
|coexpression_cluster_id=C115 | |coexpression_cluster_id=C115 | ||
|description=CAGE_peak_17_at_THRB_5end | |description=CAGE_peak_17_at_THRB_5end | ||
|id=chr3:24206603..24206613,- | |id=chr3:24206603..24206613,- | ||
|ontology_enrichment_celltype=CL:0002541!2.17e-21!3;CL:0002535!4.34e-09!2 | |ontology_enrichment_celltype=CL:0002541!2.17e-21!3;CL:0002535!4.34e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;5.70e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.70e-21,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;3.79e-11;4!DOID:4362;3.22e-09;5!DOID:1325;6.39e-07;7!DOID:3904;6.39e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.79e-11,4;DOID:4362,3.22e-09,5;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000007!3.92e-32!2;UBERON:0000476!2.17e-21!3;UBERON:0000920!2.17e-21!3;UBERON:0003296!1.31e-16!4;UBERON:0010133!1.31e-16!4;UBERON:0002581!3.07e-16!1;UBERON:0005631!1.90e-10!14;UBERON:0000158!1.90e-10!14;UBERON:0001894!6.69e-10!7;UBERON:0006222!6.69e-10!7;UBERON:0003124!9.95e-10!7;UBERON:0002780!4.01e-09!41;UBERON:0001890!4.01e-09!41;UBERON:0006240!4.01e-09!41;UBERON:0006955!4.34e-09!2;UBERON:0004801!4.34e-09!2;UBERON:0003080!6.55e-09!42;UBERON:0001876!7.49e-09!2;UBERON:0001871!1.59e-08!7;UBERON:0001950!4.70e-07!20 | |ontology_enrichment_uberon=UBERON:0000007!3.92e-32!2;UBERON:0000476!2.17e-21!3;UBERON:0000920!2.17e-21!3;UBERON:0003296!1.31e-16!4;UBERON:0010133!1.31e-16!4;UBERON:0002581!3.07e-16!1;UBERON:0005631!1.90e-10!14;UBERON:0000158!1.90e-10!14;UBERON:0001894!6.69e-10!7;UBERON:0006222!6.69e-10!7;UBERON:0003124!9.95e-10!7;UBERON:0002780!4.01e-09!41;UBERON:0001890!4.01e-09!41;UBERON:0006240!4.01e-09!41;UBERON:0006955!4.34e-09!2;UBERON:0004801!4.34e-09!2;UBERON:0003080!6.55e-09!42;UBERON:0001876!7.49e-09!2;UBERON:0001871!1.59e-08!7;UBERON:0001950!4.70e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.28e-79;2!UBERON:0003296;1.64e-40;4!UBERON:0010133;1.64e-40;4!UBERON:0001894;1.08e-23;7!UBERON:0006955;5.70e-21;2!UBERON:0004801;5.70e-21;2!UBERON:0000002;6.78e-08;6!UBERON:0001560;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0006955,5.70e-21,2;UBERON:0004801,5.70e-21,2;UBERON:0000002,6.78e-08,6;UBERON:0001560,6.78e-08,6 | |||
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|short_description=p17@THRB | |short_description=p17@THRB | ||
}} | }} |
Latest revision as of 20:04, 17 September 2015
Short description: | p17@THRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_THRB_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | 336bp_to_X74497_5end |
EntrezGene: | THRB |
HGNC: | 11799 |
UniProt: | P10828 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p17@THRB |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.70e-21 | 2 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
uterine epithelium | 5.70e-21 | 2 |
cervix epithelium | 5.70e-21 | 2 |
uterine cervix | 6.78e-08 | 6 |
neck of organ | 6.78e-08 | 6 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.79e-11 | 4 |
cervical cancer | 3.22e-09 | 5 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |
Showing 1 to 4 of 4 entries