FFCP PHASE1:Hg19::chr1:36549993..36550009,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27285 | |EntrezGene=27285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11725 | |HGNC=11725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_uc001bzs.2_5end | |association_with_transcript=48bp_to_uc001bzs.2_5end | ||
|cluster_id=chr1:36549993..36550009,+ | |||
|description=CAGE_peak_2_at_TEKT2_5end | |description=CAGE_peak_2_at_TEKT2_5end | ||
|id=chr1:36549993..36550009,+ | |id=chr1:36549993..36550009,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;9.86e-18;2!CL:0002535;9.86e-18;2!CL:0000333;5.73e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,7.67e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.94e-14;10!UBERON:0005564;2.94e-14;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;6.78e-08;5!DOID:169;7.58e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.13e-08,5;DOID:169,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.02e-14!94;UBERON:0001016!2.02e-14!94;UBERON:0002346!1.02e-13!90;UBERON:0005743!3.58e-13!86;UBERON:0001017!5.04e-13!82;UBERON:0000955!1.46e-11!69;UBERON:0006238!1.46e-11!69;UBERON:0001049!1.88e-11!57;UBERON:0005068!1.88e-11!57;UBERON:0006241!1.88e-11!57;UBERON:0007135!1.88e-11!57;UBERON:0007023!2.14e-11!115;UBERON:0003075!3.62e-11!86;UBERON:0007284!3.62e-11!86;UBERON:0002616!6.95e-11!59;UBERON:0000924!6.51e-10!173;UBERON:0006601!6.51e-10!173;UBERON:0003056!1.92e-09!61;UBERON:0000153!4.63e-09!129;UBERON:0007811!4.63e-09!129;UBERON:0002780!1.06e-08!41;UBERON:0001890!1.06e-08!41;UBERON:0006240!1.06e-08!41;UBERON:0000033!1.85e-08!123;UBERON:0003080!2.07e-08!42;UBERON:0002020!2.38e-08!34;UBERON:0003528!2.38e-08!34;UBERON:0001893!3.01e-08!34;UBERON:0004121!3.64e-08!169;UBERON:0001869!1.45e-07!32;UBERON:0002791!2.26e-07!33;UBERON:0002021!3.19e-07!5;UBERON:0000988!9.95e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;9.86e-18;2!UBERON:0006955;9.86e-18;2!UBERON:0004801;9.86e-18;2!UBERON:0000473;1.50e-17;8!UBERON:0003135;4.66e-13;11!UBERON:0000013;5.73e-08;5!UBERON:0002410;5.73e-08;5!UBERON:0000991;2.64e-07;21!UBERON:0003101;5.17e-07;22!UBERON:0000079;5.17e-07;22!UBERON:0000002;8.72e-07;6!UBERON:0001560;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,7.67e-18,2;UBERON:0004801,7.67e-18,2;UBERON:0003127,1.07e-17,2;UBERON:0000473,1.71e-17,8;UBERON:0003135,5.10e-13,11;UBERON:0000013,5.73e-08,5;UBERON:0002410,5.73e-08,5;UBERON:0000991,2.77e-07,21;UBERON:0009196,2.77e-07,21;UBERON:0009117,2.77e-07,21;UBERON:0005564,2.77e-07,21;UBERON:0004176,5.40e-07,22;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22;UBERON:0003133,6.25e-07,48;UBERON:0000002,8.02e-07,6;UBERON:0001560,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.982343066232845,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0.347249989866585,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0.137539436597234,0.83088067605837,0,0,0.0607495566580247,0,0,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.124192805882767,0.276697269872462,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,2.83078695340614,0,0.33946505990805,0.425149840203366,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.504143392443436,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0.351742488719241,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.594600453887843,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0.506794004045748,0,0,0.0918948995348449,0,1.13668047327359,3.48353369203032,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0.190941474834495,0.404234377916439,0,0,0.0673520530145875,1.2192774916755,0,0,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.982343066232845,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0.347249989866585,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0.137539436597234,0.83088067605837,0,0,0.0607495566580247,0,0,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.124192805882767,0.276697269872462,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,2.83078695340614,0,0.33946505990805,0.425149840203366,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.504143392443436,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0.351742488719241,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.594600453887843,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0.506794004045748,0,0,0.0918948995348449,0,1.13668047327359,3.48353369203032,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0.190941474834495,0.404234377916439,0,0,0.0673520530145875,1.2192774916755,0,0,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p2@TEKT2 | |short_description=p2@TEKT2 | ||
}} | }} |
Latest revision as of 20:11, 17 September 2015
Short description: | p2@TEKT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TEKT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_uc001bzs.2_5end |
EntrezGene: | TEKT2 |
HGNC: | 11725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 7.67e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 7.67e-18 | 2 |
cervix epithelium | 7.67e-18 | 2 |
open tracheal system trachea | 1.07e-17 | 2 |
testis | 1.71e-17 | 8 |
male reproductive organ | 5.10e-13 | 11 |
sympathetic nervous system | 5.73e-08 | 5 |
autonomic nervous system | 5.73e-08 | 5 |
gonad | 2.77e-07 | 21 |
indifferent external genitalia | 2.77e-07 | 21 |
indifferent gonad | 2.77e-07 | 21 |
gonad primordium | 2.77e-07 | 21 |
external genitalia | 5.40e-07 | 22 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |
reproductive organ | 6.25e-07 | 48 |
uterine cervix | 8.02e-07 | 6 |
neck of organ | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.13e-08 | 5 |
neuroendocrine tumor | 7.58e-07 | 6 |