FFCP PHASE1:Hg19::chr2:162016916..162016954,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10010 | |EntrezGene=10010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11562 | |HGNC=11562 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQA9,E7EM55,E9PEK1,E7ERM9,B2R7S3,Q6NW12,Q92844 | |UniProt=E7EQA9,E7EM55,E9PEK1,E7ERM9,B2R7S3,Q6NW12,Q92844 | ||
|association_with_transcript=0bp_to_ENST00000405852,ENST00000432692,ENST00000441987,ENST00000457887,ENST00000477952,ENST00000494976,NM_001199135,uc002ubs.2_5end | |association_with_transcript=0bp_to_ENST00000405852,ENST00000432692,ENST00000441987,ENST00000457887,ENST00000477952,ENST00000494976,NM_001199135,uc002ubs.2_5end | ||
|cluster_id=chr2:162016916..162016954,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_TANK_5end | |description=CAGE_peak_1_at_TANK_5end | ||
|id=chr2:162016916..162016954,+ | |id=chr2:162016916..162016954,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.08e-27!42;CL:0000860!1.05e-23!45;CL:0000766!5.58e-17!76;CL:0000839!7.34e-14!70;CL:0000738!4.07e-13!140;CL:0000557!7.10e-13!71;CL:0002009!1.39e-12!65;CL:0002194!5.07e-12!63;CL:0000576!5.07e-12!63;CL:0000040!5.07e-12!63;CL:0000559!5.07e-12!63;CL:0000134!8.38e-11!358;CL:0002031!3.31e-10!124;CL:0002320!4.41e-10!365;CL:0000763!7.12e-10!112;CL:0000049!7.12e-10!112;CL:0002087!9.42e-09!119;CL:0000037!2.28e-08!172;CL:0000566!2.28e-08!172;CL:0002032!6.63e-08!165;CL:0000837!6.63e-08!165;CL:0000988!6.09e-07!182 | |ontology_enrichment_celltype=CL:0002057!5.08e-27!42;CL:0000860!1.05e-23!45;CL:0000766!5.58e-17!76;CL:0000839!7.34e-14!70;CL:0000738!4.07e-13!140;CL:0000557!7.10e-13!71;CL:0002009!1.39e-12!65;CL:0002194!5.07e-12!63;CL:0000576!5.07e-12!63;CL:0000040!5.07e-12!63;CL:0000559!5.07e-12!63;CL:0000134!8.38e-11!358;CL:0002031!3.31e-10!124;CL:0002320!4.41e-10!365;CL:0000763!7.12e-10!112;CL:0000049!7.12e-10!112;CL:0002087!9.42e-09!119;CL:0000037!2.28e-08!172;CL:0000566!2.28e-08!172;CL:0002032!6.63e-08!165;CL:0000837!6.63e-08!165;CL:0000988!6.09e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.11e-20;33!CL:0002057;4.11e-20;33!CL:0000576;3.62e-14;48!CL:0000473;7.66e-12;39!CL:0000234;7.66e-12;39!CL:0000766;1.24e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.08e-27,42;CL:0002057,5.08e-27,42;CL:0000473,3.75e-20,48;CL:0000234,3.75e-20,48;CL:0000766,8.32e-19,72;CL:0000839,1.59e-15,66;CL:0000557,1.98e-14,67;CL:0002009,3.23e-14,61;CL:0000738,4.38e-14,136;CL:0002194,1.23e-13,59;CL:0000576,1.23e-13,59;CL:0000040,1.23e-13,59;CL:0000559,1.23e-13,59;CL:0000134,1.38e-11,354;CL:0002031,4.40e-11,120;CL:0002320,7.92e-11,361;CL:0000763,8.63e-11,108;CL:0000049,8.63e-11,108;CL:0002087,1.48e-09,115;CL:0000037,5.48e-09,168;CL:0002032,1.63e-08,161;CL:0000837,1.63e-08,161;CL:0000988,9.91e-08,177;CL:0000219,4.36e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.90e-15!102;UBERON:0003061!1.90e-15!102;UBERON:0002371!1.01e-11!80;UBERON:0002193!3.55e-11!112;UBERON:0004765!4.10e-11!101;UBERON:0001434!4.10e-11!101;UBERON:0001474!1.63e-10!86;UBERON:0002384!5.93e-10!375;UBERON:0002405!1.17e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.90e-15!102;UBERON:0003061!1.90e-15!102;UBERON:0002371!1.01e-11!80;UBERON:0002193!3.55e-11!112;UBERON:0004765!4.10e-11!101;UBERON:0001434!4.10e-11!101;UBERON:0001474!1.63e-10!86;UBERON:0002384!5.93e-10!375;UBERON:0002405!1.17e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.23e-17,98;UBERON:0003061,8.23e-17,98;UBERON:0002371,4.82e-13,76;UBERON:0002193,3.52e-12,108;UBERON:0004765,5.65e-12,90;UBERON:0001434,8.12e-12,100;UBERON:0001474,1.14e-11,82;UBERON:0002384,1.10e-10,371;UBERON:0002405,4.42e-08,93 | |||
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| ||
|short_description=p1@TANK | |short_description=p1@TANK | ||
}} | }} |
Latest revision as of 20:18, 17 September 2015
Short description: | p1@TANK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TANK_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000405852, ENST00000432692, ENST00000441987, ENST00000457887, ENST00000477952, ENST00000494976, NM_001199135, uc002ubs.2_5end |
EntrezGene: | TANK |
HGNC: | 11562 |
UniProt: | E7EQA9E7EM55E9PEK1E7ERM9B2R7S3Q6NW12Q92844 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.08e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.08e-27 | 42 |
defensive cell | 3.75e-20 | 48 |
phagocyte | 3.75e-20 | 48 |
myeloid leukocyte | 8.32e-19 | 72 |
myeloid lineage restricted progenitor cell | 1.59e-15 | 66 |
granulocyte monocyte progenitor cell | 1.98e-14 | 67 |
macrophage dendritic cell progenitor | 3.23e-14 | 61 |
leukocyte | 4.38e-14 | 136 |
monopoietic cell | 1.23e-13 | 59 |
monocyte | 1.23e-13 | 59 |
monoblast | 1.23e-13 | 59 |
promonocyte | 1.23e-13 | 59 |
mesenchymal cell | 1.38e-11 | 354 |
hematopoietic lineage restricted progenitor cell | 4.40e-11 | 120 |
connective tissue cell | 7.92e-11 | 361 |
myeloid cell | 8.63e-11 | 108 |
common myeloid progenitor | 8.63e-11 | 108 |
nongranular leukocyte | 1.48e-09 | 115 |
hematopoietic stem cell | 5.48e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.63e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-08 | 161 |
hematopoietic cell | 9.91e-08 | 177 |
motile cell | 4.36e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.23e-17 | 98 |
blood island | 8.23e-17 | 98 |
bone marrow | 4.82e-13 | 76 |
hemolymphoid system | 3.52e-12 | 108 |
skeletal element | 5.65e-12 | 90 |
skeletal system | 8.12e-12 | 100 |
bone element | 1.14e-11 | 82 |
connective tissue | 1.10e-10 | 371 |
immune system | 4.42e-08 | 93 |