FFCP PHASE1:Hg19::chr1:36621837..36621853,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:36621837..36621853,+ to FFCP PHASE1:Hg19::chr1:36621837..36621853,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55700 | |EntrezGene=55700 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25514 | |HGNC=25514 | ||
|TSSclassifier=strong | |||
|UniProt=Q3KQU3 | |UniProt=Q3KQU3 | ||
|association_with_transcript=34bp_to_ENST00000373151,NM_018067,uc001bzz.2,uc001caa.2,uc001cab.2_5end | |||
|cluster_id=chr1:36621837..36621853,+ | |||
|description=CAGE_peak_3_at_MAP7D1_5end | |||
|id=chr1:36621837..36621853,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.14e-13!119;CL:0000144!2.31e-11!625;CL:0002371!3.45e-11!591;CL:0000183!4.44e-09!59;CL:0000680!5.34e-09!57;CL:0000056!5.34e-09!57;CL:0000355!5.34e-09!57;CL:0000192!1.00e-08!42;CL:0000514!1.00e-08!42;CL:0000220!1.50e-08!246;CL:0000187!1.75e-08!54;CL:0000055!3.66e-08!180;CL:0002321!4.56e-08!248;CL:0000359!7.32e-08!32;CL:0000076!8.84e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.71e-08;32!CL:0000192;2.85e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.48e-13,121;CL:0000680,3.13e-09,58;CL:0000056,3.13e-09,58;CL:0000355,3.13e-09,58;CL:0000192,6.30e-09,43;CL:0000514,6.30e-09,43;CL:0002321,7.04e-09,250;CL:0000187,1.11e-08,55;CL:0000359,2.44e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.85e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.11e-10!42;UBERON:0003509!1.11e-10!42;UBERON:0004572!1.11e-10!42;UBERON:0002049!1.28e-10!79;UBERON:0007798!1.28e-10!79;UBERON:0000055!1.89e-10!69;UBERON:0001981!3.81e-10!60;UBERON:0007500!3.81e-10!60;UBERON:0004537!3.81e-10!60;UBERON:0006965!3.81e-10!60;UBERON:0000486!1.08e-09!82;UBERON:0002204!2.31e-09!167;UBERON:0000914!1.42e-08!83;UBERON:0002329!1.42e-08!83;UBERON:0003077!1.42e-08!83;UBERON:0003059!1.42e-08!83;UBERON:0007282!1.42e-08!83;UBERON:0009618!1.42e-08!83;UBERON:0007285!1.42e-08!83;UBERON:0004573!3.09e-08!33;UBERON:0004571!3.09e-08!33;UBERON:0004290!7.02e-08!70;UBERON:0001009!9.23e-08!113;UBERON:0004872!1.08e-07!84;UBERON:0003081!1.63e-07!216;UBERON:0001134!1.66e-07!61;UBERON:0002036!1.66e-07!61;UBERON:0003082!1.66e-07!61;UBERON:0004535!1.68e-07!110;UBERON:0000119!3.52e-07!312;UBERON:0002385!3.84e-07!63;UBERON:0001015!3.84e-07!63;UBERON:0000383!3.84e-07!63;UBERON:0000483!5.03e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.14e-08;42!UBERON:0003509;8.14e-08;42!UBERON:0004572;8.14e-08;42!UBERON:0004573;3.54e-07;33!UBERON:0004571;3.54e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.27e-11,42;UBERON:0003509,2.27e-11,42;UBERON:0004572,2.27e-11,42;UBERON:0000055,7.78e-11,68;UBERON:0002049,7.91e-11,78;UBERON:0007798,7.91e-11,78;UBERON:0007500,9.34e-11,59;UBERON:0001981,9.34e-11,59;UBERON:0004537,9.34e-11,59;UBERON:0006965,9.34e-11,59;UBERON:0000486,6.08e-10,83;UBERON:0002204,2.59e-09,167;UBERON:0007503,4.91e-09,78;UBERON:0004573,9.66e-09,33;UBERON:0004571,9.66e-09,33;UBERON:0002329,3.33e-08,71;UBERON:0003059,3.33e-08,71;UBERON:0007282,3.33e-08,71;UBERON:0004290,3.33e-08,71;UBERON:0009618,3.33e-08,71;UBERON:0003077,3.42e-08,72;UBERON:0007285,3.42e-08,72;UBERON:0001009,3.99e-08,112;UBERON:0007524,4.79e-08,73;UBERON:0001134,6.29e-08,62;UBERON:0002036,6.29e-08,62;UBERON:0003082,6.29e-08,62;UBERON:0004535,7.60e-08,109;UBERON:0000119,8.46e-08,309;UBERON:0000483,9.89e-08,306;UBERON:0004872,1.41e-07,83;UBERON:0002385,1.55e-07,64;UBERON:0001015,1.55e-07,64;UBERON:0000383,1.55e-07,64;UBERON:0003081,3.48e-07,203 | |||
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| ||
|short_description=p3@MAP7D1 | |||
}} | }} |
Latest revision as of 20:26, 17 September 2015
Short description: | p3@MAP7D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAP7D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_ENST00000373151, NM_018067, uc001bzz.2, uc001caa.2, uc001cab.2_5end |
EntrezGene: | MAP7D1 |
HGNC: | 25514 |
UniProt: | Q3KQU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.48e-13 | 121 |
muscle precursor cell | 3.13e-09 | 58 |
myoblast | 3.13e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.13e-09 | 58 |
smooth muscle cell | 6.30e-09 | 43 |
smooth muscle myoblast | 6.30e-09 | 43 |
embryonic cell | 7.04e-09 | 250 |
muscle cell | 1.11e-08 | 55 |
vascular associated smooth muscle cell | 2.44e-08 | 32 |