FFCP PHASE1:Hg19::chr19:39279838..39279845,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=3963,653499 | |EntrezGene=3963,653499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=34447,6568 | |HGNC=34447,6568 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P47929 | |UniProt=P47929 | ||
|association_with_transcript=0bp_to_ENST00000314980_5end | |association_with_transcript=0bp_to_ENST00000314980_5end | ||
|cluster_id=chr19:39279838..39279845,+ | |||
|coexpression_cluster_id=C2397 | |coexpression_cluster_id=C2397 | ||
|description=CAGE_peak_1_at_LGALS7B_5end,CAGE_peak_1_at_LGALS7_5end | |description=CAGE_peak_1_at_LGALS7B_5end,CAGE_peak_1_at_LGALS7_5end | ||
Latest revision as of 20:27, 17 September 2015
| Short description: | p1@LGALS7B, p1@LGALS7 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LGALS7B_5end, CAGE_peak_1_at_LGALS7_5end |
| Coexpression cluster: | C2397_nasal_immature_Hep2_Mallassezderived_Small_amniotic_acute |
| Association with transcript: | 0bp_to_ENST00000314980_5end |
| EntrezGene: | 3963,653499 |
| HGNC: | 6568&submit=Submit 34447, 6568 |
| UniProt: | P47929 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@LGALS7Bp1@LGALS7 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| receptor cell | 5.98e-34 | 6 |
| sensory epithelial cell | 5.98e-34 | 6 |
| olfactory epithelial cell | 5.98e-34 | 6 |
| CD1a-positive Langerhans cell | 7.14e-26 | 2 |
| immature CD1a-positive Langerhans cell | 7.14e-26 | 2 |
| Langerhans cell | 3.26e-11 | 5 |
| neurecto-epithelial cell | 5.16e-11 | 20 |
| immature conventional dendritic cell | 1.44e-09 | 5 |
| common dendritic progenitor | 1.44e-09 | 5 |
| columnar/cuboidal epithelial cell | 1.98e-08 | 27 |
Showing 1 to 10 of 12 entries
