FFCP PHASE1:Hg19::chr7:23309737..23309748,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10457 | |EntrezGene=10457 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4462 | |HGNC=4462 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=75bp_to_ENST00000470994_5end | |association_with_transcript=75bp_to_ENST00000470994_5end | ||
|cluster_id=chr7:23309737..23309748,+ | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_10_at_GPNMB_5end | |description=CAGE_peak_10_at_GPNMB_5end | ||
|id=chr7:23309737..23309748,+ | |id=chr7:23309737..23309748,+ | ||
|ontology_enrichment_celltype=CL:0000235!3.24e-08!10;CL:0002619!5.67e-08!3 | |ontology_enrichment_celltype=CL:0000235!3.24e-08!10;CL:0002619!5.67e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000235;6.62e-26;6!CL:0002619;3.48e-23;3!CL:0002617;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.62e-26,6;CL:0002619,3.29e-23,3;CL:0002194,7.25e-10,59;CL:0000576,7.25e-10,59;CL:0000040,7.25e-10,59;CL:0000559,7.25e-10,59;CL:0002009,1.54e-09,61;CL:0002617,1.71e-09,2;CL:0000839,8.24e-09,66;CL:0000557,1.12e-08,67;CL:0000766,4.58e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.12e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.12e-17;1!UBERON:0002081;1.64e-09;2!UBERON:0004151;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,7.37e-18,1;UBERON:0002081,1.33e-09,2;UBERON:0010227,1.33e-09,2;UBERON:0002371,1.24e-07,76;UBERON:0001474,4.63e-07,82;UBERON:0004151,8.15e-07,3 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03047853631864,2.59114932815184,0.515151135268373,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.468008530278475,0.891786973732369,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.253991577168676,0,0,0,0.411309970813294,0.600686115687835,0.571652865261156,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,7.29742683847143,11.0496560115068,31.6250909224547,0.239624855491583,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,2.27407504055985,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0.378806010550178,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,1.0362910251936,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0.550285795565037,0,0.381382095467167,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0.54503513781167,1.07050261945492,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03047853631864,2.59114932815184,0.515151135268373,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.468008530278475,0.891786973732369,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.253991577168676,0,0,0,0.411309970813294,0.600686115687835,0.571652865261156,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,7.29742683847143,11.0496560115068,31.6250909224547,0.239624855491583,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,2.27407504055985,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0.378806010550178,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,1.0362910251936,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0.550285795565037,0,0.381382095467167,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p10@GPNMB | |short_description=p10@GPNMB | ||
}} | }} |
Latest revision as of 20:29, 17 September 2015
Short description: | p10@GPNMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GPNMB_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 75bp_to_ENST00000470994_5end |
EntrezGene: | GPNMB |
HGNC: | 4462 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.62e-26 | 6 |
adult endothelial progenitor cell | 3.29e-23 | 3 |
monopoietic cell | 7.25e-10 | 59 |
monocyte | 7.25e-10 | 59 |
monoblast | 7.25e-10 | 59 |
promonocyte | 7.25e-10 | 59 |
macrophage dendritic cell progenitor | 1.54e-09 | 61 |
adipocyte of breast | 1.71e-09 | 2 |
myeloid lineage restricted progenitor cell | 8.24e-09 | 66 |
granulocyte monocyte progenitor cell | 1.12e-08 | 67 |
myeloid leukocyte | 4.58e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 7.37e-18 | 1 |
cardiac atrium | 1.33e-09 | 2 |
future cardiac atrium | 1.33e-09 | 2 |
bone marrow | 1.24e-07 | 76 |
bone element | 4.63e-07 | 82 |
cardiac chamber | 8.15e-07 | 3 |