FFCP PHASE1:Hg19::chr21:19832983..19833012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5651 | |EntrezGene=5651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9490 | |HGNC=9490 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENST00000474775_5end | |association_with_transcript=36bp_to_ENST00000474775_5end | ||
|cluster_id=chr21:19832983..19833012,- | |||
|coexpression_cluster_id=C62 | |coexpression_cluster_id=C62 | ||
|description=CAGE_peak_3_at_TMPRSS15_5end | |description=CAGE_peak_3_at_TMPRSS15_5end | ||
|id=chr21:19832983..19833012,- | |id=chr21:19832983..19833012,- | ||
|ontology_enrichment_celltype=CL:0000785;3.99e-50;1!CL:0000819;3.99e-50;1!CL:0000047;7.14e-26;2!CL:0000945;2.00e-19;24!CL:0000236;3.07e-16;13!CL:0000542;3.20e-11;53 | |ontology_enrichment_celltype=CL:0000819!5.53e-17!1;CL:0002127!3.07e-16!1;CL:0000914!3.07e-16!1;CL:0000911!3.07e-16!1;CL:0000814!3.07e-16!1;CL:0002042!3.07e-16!1;CL:0002039!3.07e-16!1;CL:0002040!3.07e-16!1;CL:0002041!3.07e-16!1;CL:0000945!1.13e-10!24;CL:0000826!1.13e-10!24;CL:0000236!1.37e-10!14;CL:0000542!3.01e-10!53;CL:0000051!3.01e-10!53;CL:0000785!3.71e-09!2;CL:0000955!3.71e-09!2;CL:0000818!3.71e-09!2;CL:0000954!3.71e-09!2;CL:0000816!3.71e-09!2;CL:0000893!8.74e-09!2;CL:0002489!8.74e-09!2;CL:0000809!8.74e-09!2;CL:0000808!8.74e-09!2;CL:0000894!8.74e-09!2;CL:0000806!8.74e-09!2;CL:0000807!8.74e-09!2;CL:0000805!8.74e-09!2;CL:0002425!8.74e-09!2;CL:0000838!2.02e-07!52 | ||
| | |ontology_enrichment_celltype_v019=CL:0000785;3.99e-50;1!CL:0000819;3.99e-50;1!CL:0000047;7.14e-26;2!CL:0000945;2.00e-19;24!CL:0000236;3.07e-16;13!CL:0000542;3.20e-11;53 | ||
|ontology_enrichment_disease=DOID:0060073;3.99e-50;1!DOID:8675;3.99e-50;1!DOID:0060058;7.72e-21;10 | |ontology_enrichment_celltype_v019_2=CL:0000819,2.42e-50,1;CL:0000785,5.56e-26,2;CL:0000955,5.56e-26,2;CL:0000818,5.56e-26,2;CL:0000954,5.56e-26,2;CL:0000816,5.56e-26,2;CL:0000945,2.00e-19,24;CL:0000826,2.00e-19,24;CL:0000817,8.00e-18,3;CL:0000236,3.66e-15,14;CL:0000838,1.78e-09,52;CL:0000542,2.59e-09,53;CL:0000051,2.59e-09,53;CL:0000047,1.69e-07,8 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0000954;7.14e-26;2!CL:0000051;3.20e-11;53 | ||
|ontology_enrichment_disease=DOID:0060073!5.53e-17!1;DOID:8675!5.53e-17!1;DOID:12603!8.86e-17!1;DOID:0060058!3.33e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.99e-50;1!DOID:8675;3.99e-50;1!DOID:0060058;7.72e-21;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.42e-50,1;DOID:8675,2.42e-50,1;DOID:0060058,6.99e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0002372!2.25e-16!1;UBERON:0001961!2.25e-16!1;UBERON:0001744!2.25e-16!1;UBERON:0001735!2.25e-16!1;UBERON:0004177!1.68e-09!7;UBERON:0003127!5.94e-09!2;UBERON:0001042!6.31e-07!10;UBERON:0009145!6.31e-07!10 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@TMPRSS15 | |short_description=p3@TMPRSS15 | ||
}} | }} |
Latest revision as of 20:41, 17 September 2015
Short description: | p3@TMPRSS15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMPRSS15_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | 36bp_to_ENST00000474775_5end |
EntrezGene: | TMPRSS15 |
HGNC: | 9490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.42e-50 | 1 |
mature B cell | 5.56e-26 | 2 |
pre-B-II cell | 5.56e-26 | 2 |
transitional stage B cell | 5.56e-26 | 2 |
small pre-B-II cell | 5.56e-26 | 2 |
immature B cell | 5.56e-26 | 2 |
lymphocyte of B lineage | 2.00e-19 | 24 |
pro-B cell | 2.00e-19 | 24 |
precursor B cell | 8.00e-18 | 3 |
B cell | 3.66e-15 | 14 |
lymphoid lineage restricted progenitor cell | 1.78e-09 | 52 |
lymphocyte | 2.59e-09 | 53 |
common lymphoid progenitor | 2.59e-09 | 53 |
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.42e-50 | 1 |
lymphosarcoma | 2.42e-50 | 1 |
lymphoma | 6.99e-21 | 10 |