FFCP PHASE1:Hg19::chr1:36789257..36789268,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:36789257..36789268,-
|short_description=p2@FAM176B
|description=CAGE_peak_2_at_FAM176B_5end
|association_with_transcript=-41bp_to_ENST00000490466_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55194 | |EntrezGene=55194 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25558 | |HGNC=25558 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_ENST00000490466_5end | |||
|cluster_id=chr1:36789257..36789268,- | |||
|coexpression_cluster_id=C1437 | |||
|description=CAGE_peak_2_at_FAM176B_5end | |||
|id=chr1:36789257..36789268,- | |||
|ontology_enrichment_celltype=CL:0000055!3.91e-32!180;CL:0000183!4.22e-18!59;CL:0000222!7.95e-18!119;CL:0000680!2.62e-16!57;CL:0000056!2.62e-16!57;CL:0000355!2.62e-16!57;CL:0000187!1.46e-15!54;CL:0002371!6.44e-15!591;CL:0000144!1.12e-14!625;CL:0000393!5.83e-14!60;CL:0000211!5.83e-14!60;CL:0000057!3.38e-13!75;CL:0000192!3.86e-13!42;CL:0000514!3.86e-13!42;CL:0000359!1.50e-10!32;CL:0000220!2.53e-09!246;CL:0002321!4.76e-09!248;CL:0000548!9.43e-09!679;CL:0000004!9.43e-09!679;CL:0000255!9.43e-09!679;CL:0000012!1.47e-08!682;CL:0000048!3.61e-08!430;CL:0000499!2.83e-07!27;CL:0000723!3.28e-07!436;CL:0000034!9.36e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.23e-10;43!CL:0000359;1.05e-09;32!CL:0000187;1.90e-09;55!CL:0000393;7.18e-09;61!CL:0000211;7.18e-09;61!CL:0000499;3.40e-08;28!CL:0000327;2.20e-07;15!CL:0002334;3.08e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.03e-18,58;CL:0000056,2.03e-18,58;CL:0000355,2.03e-18,58;CL:0000187,2.69e-17,55;CL:0000393,5.21e-15,61;CL:0000211,5.21e-15,61;CL:0000222,5.37e-15,121;CL:0000048,2.05e-14,427;CL:0000192,3.01e-14,43;CL:0000514,3.01e-14,43;CL:0000057,6.22e-14,76;CL:0000723,1.36e-13,433;CL:0000034,1.52e-12,441;CL:0000359,1.76e-10,32;CL:0000499,1.64e-08,28;CL:0002334,1.56e-07,12;CL:0000327,2.40e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;5.23e-10;43!CL:0000355;6.62e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.34e-19!83;UBERON:0002329!4.34e-19!83;UBERON:0003077!4.34e-19!83;UBERON:0003059!4.34e-19!83;UBERON:0007282!4.34e-19!83;UBERON:0009618!4.34e-19!83;UBERON:0007285!4.34e-19!83;UBERON:0004290!8.91e-19!70;UBERON:0000486!4.13e-18!82;UBERON:0005256!2.37e-17!143;UBERON:0001134!4.53e-16!61;UBERON:0002036!4.53e-16!61;UBERON:0003082!4.53e-16!61;UBERON:0002385!1.51e-15!63;UBERON:0001015!1.51e-15!63;UBERON:0000383!1.51e-15!63;UBERON:0004872!6.35e-13!84;UBERON:0002100!2.89e-12!216;UBERON:0002049!2.58e-11!79;UBERON:0007798!2.58e-11!79;UBERON:0003914!2.75e-11!118;UBERON:0001981!1.48e-10!60;UBERON:0007500!1.48e-10!60;UBERON:0004537!1.48e-10!60;UBERON:0006965!1.48e-10!60;UBERON:0001637!2.15e-10!42;UBERON:0003509!2.15e-10!42;UBERON:0004572!2.15e-10!42;UBERON:0000926!1.54e-09!448;UBERON:0004120!1.54e-09!448;UBERON:0006603!1.54e-09!448;UBERON:0000055!1.72e-09!69;UBERON:0000490!3.12e-09!138;UBERON:0004535!6.68e-09!110;UBERON:0001009!2.63e-08!113;UBERON:0004573!1.23e-07!33;UBERON:0004571!1.23e-07!33;UBERON:0002204!4.72e-07!167;UBERON:0000119!8.52e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;6.73e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.11e-25,78;UBERON:0007524,4.49e-22,73;UBERON:0002329,6.74e-22,71;UBERON:0003059,6.74e-22,71;UBERON:0007282,6.74e-22,71;UBERON:0004290,6.74e-22,71;UBERON:0009618,6.74e-22,71;UBERON:0003077,2.48e-21,72;UBERON:0007285,2.48e-21,72;UBERON:0001134,1.46e-18,62;UBERON:0002036,1.46e-18,62;UBERON:0003082,1.46e-18,62;UBERON:0000486,2.79e-18,83;UBERON:0002385,1.76e-17,64;UBERON:0001015,1.76e-17,64;UBERON:0000383,1.76e-17,64;UBERON:0003104,7.41e-17,160;UBERON:0009142,7.41e-17,160;UBERON:0005256,4.37e-16,122;UBERON:0000926,1.14e-13,315;UBERON:0004120,1.14e-13,315;UBERON:0006603,1.14e-13,315;UBERON:0004872,1.25e-11,83;UBERON:0002100,1.33e-10,199;UBERON:0000490,2.95e-10,148;UBERON:0003914,2.97e-09,117;UBERON:0001637,4.48e-09,42;UBERON:0003509,4.48e-09,42;UBERON:0004572,4.48e-09,42;UBERON:0002204,8.05e-09,167;UBERON:0007500,2.11e-08,59;UBERON:0001981,2.11e-08,59;UBERON:0004537,2.11e-08,59;UBERON:0006965,2.11e-08,59;UBERON:0002049,7.94e-08,78;UBERON:0007798,7.94e-08,78;UBERON:0003124,1.58e-07,7;UBERON:0000055,8.59e-07,68;UBERON:0004535,9.55e-07,109 | |||
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| ||
|short_description=p2@FAM176B | |||
}} | }} |
Latest revision as of 20:53, 17 September 2015
Short description: | p2@FAM176B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM176B_5end |
Coexpression cluster: | C1437_Mesenchymal_Osteoblast_Renal_Pericytes_Placental_Fibroblast_Nucleus |
Association with transcript: | -41bp_to_ENST00000490466_5end |
EntrezGene: | FAM176B |
HGNC: | 25558 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.03e-18 | 58 |
myoblast | 2.03e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.03e-18 | 58 |
muscle cell | 2.69e-17 | 55 |
electrically responsive cell | 5.21e-15 | 61 |
electrically active cell | 5.21e-15 | 61 |
mesodermal cell | 5.37e-15 | 121 |
multi fate stem cell | 2.05e-14 | 427 |
smooth muscle cell | 3.01e-14 | 43 |
smooth muscle myoblast | 3.01e-14 | 43 |
fibroblast | 6.22e-14 | 76 |
somatic stem cell | 1.36e-13 | 433 |
stem cell | 1.52e-12 | 441 |
vascular associated smooth muscle cell | 1.76e-10 | 32 |
stromal cell | 1.64e-08 | 28 |
preadipocyte | 1.56e-07 | 12 |
extracellular matrix secreting cell | 2.40e-07 | 15 |