FFCP PHASE1:Hg19::chr11:36119821..36119838,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=143458 | |EntrezGene=143458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=27046 | |HGNC=27046 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_uc010rfa.1_5end | |association_with_transcript=-38bp_to_uc010rfa.1_5end | ||
|cluster_id=chr11:36119821..36119838,+ | |||
|coexpression_cluster_id=C212 | |coexpression_cluster_id=C212 | ||
|description=CAGE_peak_3_at_LDLRAD3_5end | |description=CAGE_peak_3_at_LDLRAD3_5end | ||
|id=chr11:36119821..36119838,+ | |id=chr11:36119821..36119838,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000763;5.18e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.49e-11,108;CL:0000049,3.49e-11,108;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.04e-13!31;DOID:1036!1.33e-10!8;DOID:1240!1.65e-10!39;DOID:8552!1.80e-10!1;DOID:9119!2.16e-10!1;DOID:2531!7.51e-08!51;DOID:0060083!7.51e-08!51 | |ontology_enrichment_disease=DOID:8692!2.04e-13!31;DOID:1036!1.33e-10!8;DOID:1240!1.65e-10!39;DOID:8552!1.80e-10!1;DOID:9119!2.16e-10!1;DOID:2531!7.51e-08!51;DOID:0060083!7.51e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.37e-29;31!DOID:8552;2.78e-26;1!DOID:9119;4.61e-26;1!DOID:1240;1.73e-15;39!DOID:1036;1.83e-13;8!DOID:2531;1.58e-12;51!DOID:0060083;1.58e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.10e-29,31;DOID:8552,2.78e-26,1;DOID:9119,4.61e-26,1;DOID:1240,5.20e-23,39;DOID:2531,1.19e-17,51;DOID:0060083,1.19e-17,51;DOID:1036,1.83e-13,8 | |||
|ontology_enrichment_uberon=UBERON:0002372!9.82e-10!1;UBERON:0001961!9.82e-10!1;UBERON:0001744!9.82e-10!1;UBERON:0001735!9.82e-10!1;UBERON:0002363!1.17e-09!1;UBERON:0007647!1.17e-09!1;UBERON:0010115!1.17e-09!1 | |ontology_enrichment_uberon=UBERON:0002372!9.82e-10!1;UBERON:0001961!9.82e-10!1;UBERON:0001744!9.82e-10!1;UBERON:0001735!9.82e-10!1;UBERON:0002363!1.17e-09!1;UBERON:0007647!1.17e-09!1;UBERON:0010115!1.17e-09!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@LDLRAD3 | |short_description=p3@LDLRAD3 | ||
}} | }} |
Latest revision as of 21:13, 17 September 2015
Short description: | p3@LDLRAD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LDLRAD3_5end |
Coexpression cluster: | C212_chronic_acute_Whole_Reticulocytes_leukemia_blood_CD34 |
Association with transcript: | -38bp_to_uc010rfa.1_5end |
EntrezGene: | LDLRAD3 |
HGNC: | 27046 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.49e-11 | 108 |
common myeloid progenitor | 3.49e-11 | 108 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.10e-29 | 31 |
chronic myeloid leukemia | 2.78e-26 | 1 |
acute myeloid leukemia | 4.61e-26 | 1 |
leukemia | 5.20e-23 | 39 |
hematologic cancer | 1.19e-17 | 51 |
immune system cancer | 1.19e-17 | 51 |
chronic leukemia | 1.83e-13 | 8 |