FFCP PHASE1:Hg19::chr15:47631272..47631287,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80031 | |EntrezGene=80031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16770 | |HGNC=16770 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000560636_5end | |association_with_transcript=8bp_to_ENST00000560636_5end | ||
|cluster_id=chr15:47631272..47631287,+ | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_5_at_SEMA6D_5end | |description=CAGE_peak_5_at_SEMA6D_5end | ||
|id=chr15:47631272..47631287,+ | |id=chr15:47631272..47631287,+ | ||
|ontology_enrichment_celltype=CL:0002541!2.18e-29!3;CL:0000349!1.60e-13!3;CL:0002577!1.60e-13!3;CL:0000039!3.16e-13!7;CL:0000586!3.16e-13!7;CL:0002537!1.32e-08!5 | |ontology_enrichment_celltype=CL:0002541!2.18e-29!3;CL:0000349!1.60e-13!3;CL:0002577!1.60e-13!3;CL:0000039!3.16e-13!7;CL:0000586!3.16e-13!7;CL:0002537!1.32e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.97e-49;3!CL:0000039;3.98e-22;7!CL:0000586;3.98e-22;7!CL:0000349;1.55e-21;19!CL:0002537;5.01e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.97e-49,3;CL:0000039,3.98e-22,7;CL:0000586,3.98e-22,7;CL:0000349,1.55e-21,19;CL:0002537,5.01e-14,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.75e-18;1 | |||
|ontology_enrichment_disease=DOID:1799!3.41e-11!1;DOID:10165!3.41e-11!1;DOID:1798!3.41e-11!1;DOID:170!2.61e-07!6 | |ontology_enrichment_disease=DOID:1799!3.41e-11!1;DOID:10165!3.41e-11!1;DOID:1798!3.41e-11!1;DOID:170!2.61e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:1799;4.44e-18;1!DOID:10165;4.44e-18;1!DOID:1798;4.44e-18;1!DOID:3095;1.85e-07;22!DOID:2994;1.85e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.44e-18,1;DOID:10165,4.44e-18,1;DOID:1798,4.44e-18,1;DOID:3095,1.85e-07,22;DOID:2994,1.85e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.01e-54!14;UBERON:0000158!9.01e-54!14;UBERON:0003124!1.19e-48!7;UBERON:0000478!6.35e-31!24;UBERON:0000476!2.18e-29!3;UBERON:0000920!2.18e-29!3;UBERON:0001987!4.31e-22!4;UBERON:0004340!4.31e-22!4;UBERON:0004923!3.26e-15!57;UBERON:0000305!7.77e-13!7;UBERON:0004871!2.66e-11!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.97e-49;3!UBERON:0000920;1.97e-49;3!UBERON:0005631;1.06e-40;10!UBERON:0000158;1.06e-40;10!UBERON:0000478;2.11e-24;24!UBERON:0000305;2.70e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.97e-49,3;UBERON:0005631,8.10e-42,14;UBERON:0000158,8.10e-42,14;UBERON:0003124,8.01e-38,7;UBERON:0000478,2.11e-24,24;UBERON:0000305,2.70e-10,7;UBERON:0004871,4.02e-09,8;UBERON:0004923,8.90e-09,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0980191414768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.638249487776,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,5.04839957415486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3700372115523,4.30836693166906,235.221560211147,10.2080371114214,2.01514705484097,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8810548075154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.724593446998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0980191414768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.638249487776,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,5.04839957415486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3700372115523,4.30836693166906,235.221560211147,10.2080371114214,2.01514705484097,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8810548075154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.724593446998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@SEMA6D | |short_description=p5@SEMA6D | ||
}} | }} |
Latest revision as of 21:18, 17 September 2015
Short description: | p5@SEMA6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEMA6D_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 8bp_to_ENST00000560636_5end |
EntrezGene: | SEMA6D |
HGNC: | 16770 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.97e-49 | 3 |
germ line cell | 3.98e-22 | 7 |
germ cell | 3.98e-22 | 7 |
extraembryonic cell | 1.55e-21 | 19 |
amnion mesenchymal stem cell | 5.01e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.97e-49 | 3 |
extraembryonic membrane | 8.10e-42 | 14 |
membranous layer | 8.10e-42 | 14 |
chorion | 8.01e-38 | 7 |
extraembryonic structure | 2.11e-24 | 24 |
amnion | 2.70e-10 | 7 |
somatic layer of lateral plate mesoderm | 4.02e-09 | 8 |
organ component layer | 8.90e-09 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.44e-18 | 1 |
endocrine pancreas cancer | 4.44e-18 | 1 |
pancreatic endocrine carcinoma | 4.44e-18 | 1 |
germ cell and embryonal cancer | 1.85e-07 | 22 |
germ cell cancer | 1.85e-07 | 22 |