FFCP PHASE1:Hg19::chr21:26797217..26797228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1283 | |HGNC=1283 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-196bp_to_ENST00000440205_5end | |association_with_transcript=-196bp_to_ENST00000440205_5end | ||
|cluster_id=chr21:26797217..26797228,- | |||
|coexpression_cluster_id=C342 | |coexpression_cluster_id=C342 | ||
|description=CAGE_peak_5_at_LINC00158_5end | |description=CAGE_peak_5_at_LINC00158_5end | ||
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|ontology_enrichment_celltype=CL:0000945!4.89e-49!24;CL:0000826!4.89e-49!24;CL:0000542!3.96e-30!53;CL:0000051!3.96e-30!53;CL:0000838!4.36e-26!52;CL:0000785!8.62e-21!2;CL:0000955!8.62e-21!2;CL:0000818!8.62e-21!2;CL:0000954!8.62e-21!2;CL:0000816!8.62e-21!2;CL:0002087!2.80e-14!119;CL:0000817!3.39e-14!3;CL:0000738!7.98e-12!140;CL:0002031!1.35e-11!124;CL:0000236!1.58e-11!14;CL:0000946!1.60e-11!1;CL:0000786!1.60e-11!1;CL:0000980!1.60e-11!1;CL:0000819!4.91e-11!1;CL:0002032!1.04e-09!165;CL:0000837!1.04e-09!165;CL:0000037!3.17e-09!172;CL:0000566!3.17e-09!172;CL:0000988!1.34e-08!182 | |ontology_enrichment_celltype=CL:0000945!4.89e-49!24;CL:0000826!4.89e-49!24;CL:0000542!3.96e-30!53;CL:0000051!3.96e-30!53;CL:0000838!4.36e-26!52;CL:0000785!8.62e-21!2;CL:0000955!8.62e-21!2;CL:0000818!8.62e-21!2;CL:0000954!8.62e-21!2;CL:0000816!8.62e-21!2;CL:0002087!2.80e-14!119;CL:0000817!3.39e-14!3;CL:0000738!7.98e-12!140;CL:0002031!1.35e-11!124;CL:0000236!1.58e-11!14;CL:0000946!1.60e-11!1;CL:0000786!1.60e-11!1;CL:0000980!1.60e-11!1;CL:0000819!4.91e-11!1;CL:0002032!1.04e-09!165;CL:0000837!1.04e-09!165;CL:0000037!3.17e-09!172;CL:0000566!3.17e-09!172;CL:0000988!1.34e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.20e-44;24!CL:0000946;5.13e-23;1!CL:0000786;5.13e-23;1!CL:0000542;2.48e-14;53 | |ontology_enrichment_celltype_v019=CL:0000945;1.20e-44;24!CL:0000946;5.13e-23;1!CL:0000786;5.13e-23;1!CL:0000542;2.48e-14;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.09e-44,24;CL:0000826,1.09e-44,24;CL:0000542,2.64e-33,53;CL:0000051,2.64e-33,53;CL:0000838,6.91e-27,52;CL:0000946,4.10e-23,1;CL:0000786,4.10e-23,1;CL:0000980,4.10e-23,1;CL:0002087,3.68e-15,115;CL:0000738,8.37e-13,136;CL:0000785,2.90e-12,2;CL:0000955,2.90e-12,2;CL:0000818,2.90e-12,2;CL:0000954,2.90e-12,2;CL:0000816,2.90e-12,2;CL:0002031,1.78e-11,120;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0000817,1.30e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.48e-14;53!CL:0000954;3.24e-12;2 | |ontology_enrichment_development_v019=CL:0000051;2.48e-14;53!CL:0000954;3.24e-12;2 | ||
|ontology_enrichment_disease=DOID:0060058!5.46e-25!10;DOID:630!8.62e-12!1;DOID:0050177!8.62e-12!1;DOID:0050427!8.62e-12!1;DOID:0060060!1.45e-11!1;DOID:0060061!1.45e-11!1;DOID:8691!1.45e-11!1;DOID:12603!1.78e-11!1;DOID:2355!1.97e-11!1;DOID:3371!2.68e-11!1;DOID:4549!2.68e-11!1;DOID:5861!2.68e-11!1;DOID:6496!2.68e-11!1;DOID:0060073!4.91e-11!1;DOID:8675!4.91e-11!1 | |ontology_enrichment_disease=DOID:0060058!5.46e-25!10;DOID:630!8.62e-12!1;DOID:0050177!8.62e-12!1;DOID:0050427!8.62e-12!1;DOID:0060060!1.45e-11!1;DOID:0060061!1.45e-11!1;DOID:8691!1.45e-11!1;DOID:12603!1.78e-11!1;DOID:2355!1.97e-11!1;DOID:3371!2.68e-11!1;DOID:4549!2.68e-11!1;DOID:5861!2.68e-11!1;DOID:6496!2.68e-11!1;DOID:0060073!4.91e-11!1;DOID:8675!4.91e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:630;1.19e-23;1!DOID:0050177;1.19e-23;1!DOID:0050427;1.19e-23;1!DOID:0060060;2.34e-23;1!DOID:0060061;2.34e-23;1!DOID:8691;2.34e-23;1!DOID:12603;5.13e-23;1!DOID:2355;5.13e-23;1!DOID:0060058;2.04e-20;10!DOID:74;3.24e-12;2!DOID:1287;9.63e-07;4 | |ontology_enrichment_disease_v019=DOID:630;1.19e-23;1!DOID:0050177;1.19e-23;1!DOID:0050427;1.19e-23;1!DOID:0060060;2.34e-23;1!DOID:0060061;2.34e-23;1!DOID:8691;2.34e-23;1!DOID:12603;5.13e-23;1!DOID:2355;5.13e-23;1!DOID:0060058;2.04e-20;10!DOID:74;3.24e-12;2!DOID:1287;9.63e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:630,1.07e-23,1;DOID:0050177,1.07e-23,1;DOID:0050427,1.07e-23,1;DOID:0060060,3.28e-23,1;DOID:0060061,3.28e-23,1;DOID:8691,3.28e-23,1;DOID:12603,5.13e-23,1;DOID:2355,6.40e-23,1;DOID:0060058,2.18e-20,10;DOID:74,3.62e-12,2;DOID:2531,2.94e-07,51;DOID:0060083,2.94e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!4.14e-14!3;UBERON:0004854!4.14e-14!3;UBERON:0009034!4.14e-14!3;UBERON:0002095!4.14e-14!3;UBERON:0004782!4.14e-14!3;UBERON:0003281!4.14e-14!3;UBERON:0009664!4.14e-14!3;UBERON:0002296!4.14e-14!3;UBERON:0005602!4.14e-14!3;UBERON:0001179!4.14e-14!3;UBERON:0006293!4.14e-14!3;UBERON:0002372!6.00e-11!1;UBERON:0001961!6.00e-11!1;UBERON:0001744!6.00e-11!1;UBERON:0001735!6.00e-11!1 | |ontology_enrichment_uberon=UBERON:0002106!4.14e-14!3;UBERON:0004854!4.14e-14!3;UBERON:0009034!4.14e-14!3;UBERON:0002095!4.14e-14!3;UBERON:0004782!4.14e-14!3;UBERON:0003281!4.14e-14!3;UBERON:0009664!4.14e-14!3;UBERON:0002296!4.14e-14!3;UBERON:0005602!4.14e-14!3;UBERON:0001179!4.14e-14!3;UBERON:0006293!4.14e-14!3;UBERON:0002372!6.00e-11!1;UBERON:0001961!6.00e-11!1;UBERON:0001744!6.00e-11!1;UBERON:0001735!6.00e-11!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2857764471619,3.36612416744778,4.09296062831132,0,0,0,0,0,0,0,3.69640004467296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617792886840502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1007533168552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19979833367888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,4.80852738454849 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2857764471619,3.36612416744778,4.09296062831132,0,0,0,0,0,0,0,3.69640004467296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617792886840502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1007533168552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19979833367888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,4.80852738454849 | ||
|short_description=p5@LINC00158 | |short_description=p5@LINC00158 | ||
}} | }} |
Latest revision as of 21:49, 17 September 2015
Short description: | p5@LINC00158 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LINC00158_5end |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | -196bp_to_ENST00000440205_5end |
EntrezGene: | NA |
HGNC: | 1283 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.09e-44 | 24 |
pro-B cell | 1.09e-44 | 24 |
lymphocyte | 2.64e-33 | 53 |
common lymphoid progenitor | 2.64e-33 | 53 |
lymphoid lineage restricted progenitor cell | 6.91e-27 | 52 |
antibody secreting cell | 4.10e-23 | 1 |
plasma cell | 4.10e-23 | 1 |
plasmablast | 4.10e-23 | 1 |
nongranular leukocyte | 3.68e-15 | 115 |
leukocyte | 8.37e-13 | 136 |
mature B cell | 2.90e-12 | 2 |
pre-B-II cell | 2.90e-12 | 2 |
transitional stage B cell | 2.90e-12 | 2 |
small pre-B-II cell | 2.90e-12 | 2 |
immature B cell | 2.90e-12 | 2 |
hematopoietic lineage restricted progenitor cell | 1.78e-11 | 120 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
precursor B cell | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.07e-23 | 1 |
monogenic disease | 1.07e-23 | 1 |
xeroderma pigmentosum | 1.07e-23 | 1 |
non-Hodgkin lymphoma | 3.28e-23 | 1 |
cutaneous T cell lymphoma | 3.28e-23 | 1 |
mycosis fungoides | 3.28e-23 | 1 |
acute leukemia | 5.13e-23 | 1 |
anemia | 6.40e-23 | 1 |
lymphoma | 2.18e-20 | 10 |
hematopoietic system disease | 3.62e-12 | 2 |
hematologic cancer | 2.94e-07 | 51 |
immune system cancer | 2.94e-07 | 51 |