FFCP PHASE1:Hg19::chr11:3968515..3968532,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6786 | |EntrezGene=6786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11386 | |HGNC=11386 | ||
|TSSclassifier=strong | |||
|UniProt=E9PR07 | |UniProt=E9PR07 | ||
|association_with_transcript=-40bp_to_ENST00000532990_5end | |association_with_transcript=-40bp_to_ENST00000532990_5end | ||
|cluster_id=chr11:3968515..3968532,+ | |||
|coexpression_cluster_id=C496 | |||
|description=CAGE_peak_3_at_STIM1_5end | |description=CAGE_peak_3_at_STIM1_5end | ||
|id=chr11:3968515..3968532,+ | |id=chr11:3968515..3968532,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.73e-35!18;CL:0000789!2.73e-35!18;CL:0002420!2.73e-35!18;CL:0002419!2.73e-35!18;CL:0000790!2.73e-35!18;CL:0000084!1.78e-30!25;CL:0000827!1.78e-30!25;CL:0000625!3.99e-21!11;CL:0000838!5.78e-20!52;CL:0000542!1.85e-19!53;CL:0000051!1.85e-19!53;CL:0000738!1.38e-14!140;CL:0000624!5.47e-14!6;CL:0000037!8.42e-11!172;CL:0000566!8.42e-11!172;CL:0000988!1.13e-09!182;CL:0002087!1.36e-09!119;CL:0002031!4.90e-08!124;CL:0002032!6.57e-08!165;CL:0000837!6.57e-08!165;CL:0000898!7.35e-08!3;CL:0000623!8.08e-08!3;CL:0000825!8.08e-08!3;CL:0000842!1.73e-07!3;CL:0000767!1.94e-07!3 | |ontology_enrichment_celltype=CL:0000791!2.73e-35!18;CL:0000789!2.73e-35!18;CL:0002420!2.73e-35!18;CL:0002419!2.73e-35!18;CL:0000790!2.73e-35!18;CL:0000084!1.78e-30!25;CL:0000827!1.78e-30!25;CL:0000625!3.99e-21!11;CL:0000838!5.78e-20!52;CL:0000542!1.85e-19!53;CL:0000051!1.85e-19!53;CL:0000738!1.38e-14!140;CL:0000624!5.47e-14!6;CL:0000037!8.42e-11!172;CL:0000566!8.42e-11!172;CL:0000988!1.13e-09!182;CL:0002087!1.36e-09!119;CL:0002031!4.90e-08!124;CL:0002032!6.57e-08!165;CL:0000837!6.57e-08!165;CL:0000898!7.35e-08!3;CL:0000623!8.08e-08!3;CL:0000825!8.08e-08!3;CL:0000842!1.73e-07!3;CL:0000767!1.94e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.79e-21;18!CL:0000789;1.79e-21;18!CL:0002419;1.79e-21;18!CL:0000625;2.96e-20;11!CL:0000084;3.95e-19;25!CL:0000895;5.70e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.48e-21,18;CL:0000789,1.48e-21,18;CL:0002420,1.48e-21,18;CL:0002419,1.48e-21,18;CL:0000790,1.48e-21,18;CL:0000625,2.67e-20,11;CL:0000084,3.31e-19,25;CL:0000827,3.31e-19,25;CL:0000838,1.52e-10,52;CL:0000542,2.58e-10,53;CL:0000051,2.58e-10,53;CL:0000810,5.33e-08,1;CL:0000895,5.33e-08,1;CL:0002436,5.33e-08,1;CL:0002427,5.33e-08,1;CL:0002428,5.33e-08,1;CL:0002429,5.33e-08,1;CL:0002433,5.33e-08,1;CL:0002431,5.33e-08,1;CL:0002432,5.33e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.79e-21;18!CL:0002427;5.70e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!9.57e-11!4;UBERON:0005058!9.57e-11!4;UBERON:0009113!9.57e-11!4;UBERON:0003295!9.57e-11!4;UBERON:0005562!9.57e-11!4;UBERON:0004177!6.24e-09!7;UBERON:0003351!4.05e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.35e-15;2!UBERON:0005058;7.35e-15;2!UBERON:0009113;7.35e-15;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.57e-16,4;UBERON:0005058,5.57e-16,4;UBERON:0009113,5.57e-16,4;UBERON:0003295,5.57e-16,4;UBERON:0005562,5.57e-16,4;UBERON:0003351,8.03e-11,6;UBERON:0004177,2.43e-09,7;UBERON:0005057,2.43e-09,7 | |||
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| ||
|short_description=p3@STIM1 | |short_description=p3@STIM1 | ||
}} | }} |
Latest revision as of 22:46, 17 September 2015
Short description: | p3@STIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STIM1_5end |
Coexpression cluster: | C496_thymus_CD4_CD8_hairy_vein_chronic_Peripheral |
Association with transcript: | -40bp_to_ENST00000532990_5end |
EntrezGene: | STIM1 |
HGNC: | 11386 |
UniProt: | E9PR07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.48e-21 | 18 |
alpha-beta T cell | 1.48e-21 | 18 |
immature T cell | 1.48e-21 | 18 |
mature T cell | 1.48e-21 | 18 |
immature alpha-beta T cell | 1.48e-21 | 18 |
CD8-positive, alpha-beta T cell | 2.67e-20 | 11 |
T cell | 3.31e-19 | 25 |
pro-T cell | 3.31e-19 | 25 |
lymphoid lineage restricted progenitor cell | 1.52e-10 | 52 |
lymphocyte | 2.58e-10 | 53 |
common lymphoid progenitor | 2.58e-10 | 53 |
CD4-positive, alpha-beta thymocyte | 5.33e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.33e-08 | 1 |
mature CD4 single-positive thymocyte | 5.33e-08 | 1 |
resting double-positive thymocyte | 5.33e-08 | 1 |
double-positive blast | 5.33e-08 | 1 |
CD69-positive double-positive thymocyte | 5.33e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.33e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.33e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.33e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.57e-16 | 4 |
hemolymphoid system gland | 5.57e-16 | 4 |
thymic region | 5.57e-16 | 4 |
pharyngeal gland | 5.57e-16 | 4 |
thymus primordium | 5.57e-16 | 4 |
pharyngeal epithelium | 8.03e-11 | 6 |
hemopoietic organ | 2.43e-09 | 7 |
immune organ | 2.43e-09 | 7 |