FFCP PHASE1:Hg19::chr2:166651029..166651044,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2591 | |EntrezGene=2591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4125 | |HGNC=4125 | ||
|TSSclassifier=strong | |||
|UniProt=C9J388 | |UniProt=C9J388 | ||
|association_with_transcript=115bp_to_ENST00000431484_5end | |association_with_transcript=115bp_to_ENST00000431484_5end | ||
|cluster_id=chr2:166651029..166651044,- | |||
|coexpression_cluster_id=C260 | |||
|description=CAGE_peak_11_at_GALNT3_5end | |description=CAGE_peak_11_at_GALNT3_5end | ||
|id=chr2:166651029..166651044,- | |id=chr2:166651029..166651044,- | ||
|ontology_enrichment_celltype=CL:0000738!4.35e-35!140;CL:0000037!6.40e-35!172;CL:0000566!6.40e-35!172;CL:0002057!1.59e-34!42;CL:0000988!1.16e-31!182;CL:0000766!1.82e-31!76;CL:0000860!2.01e-31!45;CL:0002032!6.96e-31!165;CL:0000837!6.96e-31!165;CL:0002031!1.11e-27!124;CL:0000763!5.83e-27!112;CL:0000049!5.83e-27!112;CL:0002087!3.21e-26!119;CL:0000557!8.10e-26!71;CL:0000839!5.89e-25!70;CL:0002009!1.24e-21!65;CL:0002194!2.59e-21!63;CL:0000576!2.59e-21!63;CL:0000040!2.59e-21!63;CL:0000559!2.59e-21!63;CL:0002393!2.11e-10!9;CL:0002397!2.11e-10!9;CL:0000134!4.30e-08!358;CL:0002320!1.47e-07!365;CL:0002274!2.28e-07!5;CL:0000457!2.28e-07!5;CL:0002191!2.28e-07!5;CL:0000097!2.28e-07!5;CL:0000831!2.28e-07!5;CL:0002028!2.28e-07!5;CL:0000094!6.45e-07!8 | |ontology_enrichment_celltype=CL:0000738!4.35e-35!140;CL:0000037!6.40e-35!172;CL:0000566!6.40e-35!172;CL:0002057!1.59e-34!42;CL:0000988!1.16e-31!182;CL:0000766!1.82e-31!76;CL:0000860!2.01e-31!45;CL:0002032!6.96e-31!165;CL:0000837!6.96e-31!165;CL:0002031!1.11e-27!124;CL:0000763!5.83e-27!112;CL:0000049!5.83e-27!112;CL:0002087!3.21e-26!119;CL:0000557!8.10e-26!71;CL:0000839!5.89e-25!70;CL:0002009!1.24e-21!65;CL:0002194!2.59e-21!63;CL:0000576!2.59e-21!63;CL:0000040!2.59e-21!63;CL:0000559!2.59e-21!63;CL:0002393!2.11e-10!9;CL:0002397!2.11e-10!9;CL:0000134!4.30e-08!358;CL:0002320!1.47e-07!365;CL:0002274!2.28e-07!5;CL:0000457!2.28e-07!5;CL:0002191!2.28e-07!5;CL:0000097!2.28e-07!5;CL:0000831!2.28e-07!5;CL:0002028!2.28e-07!5;CL:0000094!6.45e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.23e-13;33!CL:0002057;3.23e-13;33!CL:0000473;4.60e-10;39!CL:0000234;4.60e-10;39!CL:0000236;1.12e-09;13!CL:0000766;7.06e-09;69!CL:0000576;2.00e-08;48!CL:0002087;1.81e-07;104!CL:0000763;3.85e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.94e-20,42;CL:0002057,2.94e-20,42;CL:0002032,2.89e-19,161;CL:0000837,2.89e-19,161;CL:0000037,2.61e-18,168;CL:0000473,1.70e-17,48;CL:0000234,1.70e-17,48;CL:0000988,3.43e-17,177;CL:0000738,8.96e-17,136;CL:0002087,6.31e-16,115;CL:0000766,1.72e-15,72;CL:0000763,3.08e-15,108;CL:0000049,3.08e-15,108;CL:0002031,3.87e-15,120;CL:0002194,1.26e-13,59;CL:0000576,1.26e-13,59;CL:0000040,1.26e-13,59;CL:0000559,1.26e-13,59;CL:0002009,3.98e-13,61;CL:0000839,5.23e-12,66;CL:0000557,8.36e-12,67;CL:0000236,4.58e-09,14;CL:0002393,1.63e-08,9;CL:0002397,1.63e-08,9;CL:0000134,1.40e-07,354;CL:0002320,2.36e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.64e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.26e-28!102;UBERON:0003061!5.26e-28!102;UBERON:0002193!4.57e-25!112;UBERON:0001474!7.80e-23!86;UBERON:0002371!8.09e-23!80;UBERON:0004765!2.09e-17!101;UBERON:0001434!2.09e-17!101;UBERON:0002405!8.47e-17!115;UBERON:0002384!1.39e-07!375;UBERON:0002204!3.05e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!5.26e-28!102;UBERON:0003061!5.26e-28!102;UBERON:0002193!4.57e-25!112;UBERON:0001474!7.80e-23!86;UBERON:0002371!8.09e-23!80;UBERON:0004765!2.09e-17!101;UBERON:0001434!2.09e-17!101;UBERON:0002405!8.47e-17!115;UBERON:0002384!1.39e-07!375;UBERON:0002204!3.05e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.85e-11,82;UBERON:0002390,9.24e-11,98;UBERON:0003061,9.24e-11,98;UBERON:0002371,3.30e-10,76;UBERON:0004765,4.27e-10,90;UBERON:0002193,1.46e-09,108;UBERON:0001434,6.88e-09,100;UBERON:0002405,5.00e-08,93;UBERON:0002384,4.82e-07,371 | |||
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| ||
|short_description=p11@GALNT3 | |short_description=p11@GALNT3 | ||
}} | }} |
Latest revision as of 23:52, 17 September 2015
Short description: | p11@GALNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GALNT3_5end |
Coexpression cluster: | C260_acute_chronic_Natural_NK_Basophils_biphenotypic_blood |
Association with transcript: | 115bp_to_ENST00000431484_5end |
EntrezGene: | GALNT3 |
HGNC: | 4125 |
UniProt: | C9J388 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.94e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.94e-20 | 42 |
hematopoietic oligopotent progenitor cell | 2.89e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.89e-19 | 161 |
hematopoietic stem cell | 2.61e-18 | 168 |
defensive cell | 1.70e-17 | 48 |
phagocyte | 1.70e-17 | 48 |
hematopoietic cell | 3.43e-17 | 177 |
leukocyte | 8.96e-17 | 136 |
nongranular leukocyte | 6.31e-16 | 115 |
myeloid leukocyte | 1.72e-15 | 72 |
myeloid cell | 3.08e-15 | 108 |
common myeloid progenitor | 3.08e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 3.87e-15 | 120 |
monopoietic cell | 1.26e-13 | 59 |
monocyte | 1.26e-13 | 59 |
monoblast | 1.26e-13 | 59 |
promonocyte | 1.26e-13 | 59 |
macrophage dendritic cell progenitor | 3.98e-13 | 61 |
myeloid lineage restricted progenitor cell | 5.23e-12 | 66 |
granulocyte monocyte progenitor cell | 8.36e-12 | 67 |
B cell | 4.58e-09 | 14 |
intermediate monocyte | 1.63e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.63e-08 | 9 |
mesenchymal cell | 1.40e-07 | 354 |
connective tissue cell | 2.36e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.85e-11 | 82 |
hematopoietic system | 9.24e-11 | 98 |
blood island | 9.24e-11 | 98 |
bone marrow | 3.30e-10 | 76 |
skeletal element | 4.27e-10 | 90 |
hemolymphoid system | 1.46e-09 | 108 |
skeletal system | 6.88e-09 | 100 |
immune system | 5.00e-08 | 93 |
connective tissue | 4.82e-07 | 371 |