FFCP PHASE1:Hg19::chr2:166651327..166651346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2591 | |EntrezGene=2591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4125 | |HGNC=4125 | ||
|TSSclassifier=strong | |||
|UniProt=Q14435 | |UniProt=Q14435 | ||
|association_with_transcript=-135bp_to_ENST00000392701_5end | |association_with_transcript=-135bp_to_ENST00000392701_5end | ||
|cluster_id=chr2:166651327..166651346,- | |||
|description=CAGE_peak_10_at_GALNT3_5end | |description=CAGE_peak_10_at_GALNT3_5end | ||
|id=chr2:166651327..166651346,- | |id=chr2:166651327..166651346,- | ||
|ontology_enrichment_celltype=CL:0002322!6.45e-07!5 | |ontology_enrichment_celltype=CL:0002322!6.45e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.75e-12;5!CL:0000054;2.57e-08;2!CL:0000137;2.57e-08;2!CL:0000092;2.57e-08;2!CL:0000163;3.78e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.20e-12,5;CL:0002028,4.20e-12,5;CL:0000054,2.87e-08,2;CL:0000137,2.87e-08,2;CL:0000092,2.87e-08,2;CL:0000163,4.03e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.30e-09;7!UBERON:0010122;1.86e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:201;2.77e-10;6!DOID:0060100;2.77e-10;6!DOID:4231;2.57e-08;2!DOID:200;2.57e-08;2!DOID:4305;2.57e-08;2!DOID:1907;2.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:201,2.77e-10,6;DOID:0060100,2.77e-10,6;DOID:4231,2.31e-08,2;DOID:1907,2.31e-08,2;DOID:200,2.87e-08,2;DOID:4305,2.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.94e-09!129;UBERON:0007811!1.94e-09!129;UBERON:0000924!2.04e-09!173;UBERON:0006601!2.04e-09!173;UBERON:0004121!2.69e-09!169;UBERON:0000033!3.44e-09!123;UBERON:0001049!3.81e-09!57;UBERON:0005068!3.81e-09!57;UBERON:0006241!3.81e-09!57;UBERON:0007135!3.81e-09!57;UBERON:0002298!5.97e-08!8;UBERON:0001017!6.37e-08!82;UBERON:0005743!8.10e-08!86;UBERON:0007023!1.25e-07!115;UBERON:0002616!1.49e-07!59;UBERON:0000165!4.86e-07!28;UBERON:0000930!4.86e-07!28;UBERON:0000073!6.11e-07!94;UBERON:0001016!6.11e-07!94 | |ontology_enrichment_uberon=UBERON:0000153!1.94e-09!129;UBERON:0007811!1.94e-09!129;UBERON:0000924!2.04e-09!173;UBERON:0006601!2.04e-09!173;UBERON:0004121!2.69e-09!169;UBERON:0000033!3.44e-09!123;UBERON:0001049!3.81e-09!57;UBERON:0005068!3.81e-09!57;UBERON:0006241!3.81e-09!57;UBERON:0007135!3.81e-09!57;UBERON:0002298!5.97e-08!8;UBERON:0001017!6.37e-08!82;UBERON:0005743!8.10e-08!86;UBERON:0007023!1.25e-07!115;UBERON:0002616!1.49e-07!59;UBERON:0000165!4.86e-07!28;UBERON:0000930!4.86e-07!28;UBERON:0000073!6.11e-07!94;UBERON:0001016!6.11e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.32e-20;3!UBERON:0004177;1.59e-12;5!UBERON:0005057;1.59e-12;5!UBERON:0002298;2.24e-10;6!UBERON:0001897;1.25e-08;2!UBERON:0010225;1.25e-08;2!UBERON:0001873;1.86e-08;2!UBERON:0002148;2.57e-08;2!UBERON:0006331;2.57e-08;2!UBERON:0009662;2.57e-08;2!UBERON:0000125;3.29e-07;9!UBERON:0002308;3.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.01e-20,3;UBERON:0004854,3.01e-20,3;UBERON:0009034,3.01e-20,3;UBERON:0002095,3.01e-20,3;UBERON:0004782,3.01e-20,3;UBERON:0003281,3.01e-20,3;UBERON:0009664,3.01e-20,3;UBERON:0002296,3.01e-20,3;UBERON:0005602,3.01e-20,3;UBERON:0001179,3.01e-20,3;UBERON:0006293,3.01e-20,3;UBERON:0002298,2.09e-10,6;UBERON:0004177,3.17e-09,7;UBERON:0005057,3.17e-09,7;UBERON:0003076,4.01e-09,15;UBERON:0003057,4.01e-09,15;UBERON:0001897,1.20e-08,2;UBERON:0010225,1.20e-08,2;UBERON:0001873,1.73e-08,2;UBERON:0010122,1.73e-08,2;UBERON:0002148,2.15e-08,2;UBERON:0006331,2.15e-08,2;UBERON:0009662,2.15e-08,2;UBERON:0000945,3.51e-08,8;UBERON:0010039,3.51e-08,8;UBERON:0000125,2.95e-07,9;UBERON:0002308,2.95e-07,9 | |||
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| ||
|short_description=p10@GALNT3 | |short_description=p10@GALNT3 | ||
}} | }} |
Latest revision as of 23:55, 17 September 2015
Short description: | p10@GALNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GALNT3_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_ENST00000392701_5end |
EntrezGene: | GALNT3 |
HGNC: | 4125 |
UniProt: | Q14435 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.20e-12 | 5 |
basophil mast progenitor cell | 4.20e-12 | 5 |
bone matrix secreting cell | 2.87e-08 | 2 |
osteocyte | 2.87e-08 | 2 |
osteoclast | 2.87e-08 | 2 |
endocrine cell | 4.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.01e-20 | 3 |
gastrointestinal system mesentery | 3.01e-20 | 3 |
stomach region | 3.01e-20 | 3 |
mesentery | 3.01e-20 | 3 |
gastrointestinal system serosa | 3.01e-20 | 3 |
mesentery of stomach | 3.01e-20 | 3 |
gut mesentery | 3.01e-20 | 3 |
dorsal mesentery | 3.01e-20 | 3 |
dorsal mesogastrium | 3.01e-20 | 3 |
peritoneal cavity | 3.01e-20 | 3 |
spleen primordium | 3.01e-20 | 3 |
brainstem | 2.09e-10 | 6 |
hemopoietic organ | 3.17e-09 | 7 |
immune organ | 3.17e-09 | 7 |
posterior neural tube | 4.01e-09 | 15 |
chordal neural plate | 4.01e-09 | 15 |
dorsal plus ventral thalamus | 1.20e-08 | 2 |
thalamic complex | 1.20e-08 | 2 |
caudate nucleus | 1.73e-08 | 2 |
future caudate nucleus | 1.73e-08 | 2 |
locus ceruleus | 2.15e-08 | 2 |
brainstem nucleus | 2.15e-08 | 2 |
hindbrain nucleus | 2.15e-08 | 2 |
stomach | 3.51e-08 | 8 |
food storage organ | 3.51e-08 | 8 |
neural nucleus | 2.95e-07 | 9 |
nucleus of brain | 2.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 2.77e-10 | 6 |
musculoskeletal system cancer | 2.77e-10 | 6 |
histiocytoma | 2.31e-08 | 2 |
malignant fibroxanthoma | 2.31e-08 | 2 |
giant cell tumor | 2.87e-08 | 2 |
bone giant cell tumor | 2.87e-08 | 2 |