FFCP PHASE1:Hg19::chr6:31763252..31763265,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7407 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12651 | |||
|TSSclassifier=strong | |||
|UniProt=A2ABF4 | |||
|association_with_transcript=10bp_to_ENST00000440048_5end | |||
|cluster_id=chr6:31763252..31763265,- | |||
|description=CAGE_peak_5_at_VARS_5end | |||
|id=chr6:31763252..31763265,- | |||
|ontology_enrichment_celltype=CL:0000055!4.34e-11!180;CL:0000183!1.73e-10!59;CL:0000192!1.06e-09!42;CL:0000514!1.06e-09!42;CL:0000187!1.55e-09!54;CL:0000359!1.69e-09!32;CL:0000680!1.79e-09!57;CL:0000056!1.79e-09!57;CL:0000355!1.79e-09!57;CL:0000222!8.15e-09!119;CL:0000393!9.60e-08!60;CL:0000211!9.60e-08!60;CL:0000220!9.86e-08!246;CL:0002321!1.10e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.52e-09;32!CL:0000192;1.14e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.38e-11,32;CL:0000192,2.48e-10,43;CL:0000514,2.48e-10,43;CL:0000187,2.25e-08,55;CL:0000680,5.07e-08,58;CL:0000056,5.07e-08,58;CL:0000355,5.07e-08,58;CL:0000222,3.79e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.14e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.06e-14!312;UBERON:0000483!2.27e-14!309;UBERON:0000475!1.46e-12!365;UBERON:0000025!3.37e-11!194;UBERON:0001637!6.58e-10!42;UBERON:0003509!6.58e-10!42;UBERON:0004572!6.58e-10!42;UBERON:0003914!6.73e-10!118;UBERON:0004573!9.79e-10!33;UBERON:0004571!9.79e-10!33;UBERON:0000477!1.24e-09!286;UBERON:0000486!2.33e-09!82;UBERON:0002049!4.35e-09!79;UBERON:0007798!4.35e-09!79;UBERON:0004290!1.10e-08!70;UBERON:0001981!1.26e-08!60;UBERON:0007500!1.26e-08!60;UBERON:0004537!1.26e-08!60;UBERON:0006965!1.26e-08!60;UBERON:0001134!2.62e-08!61;UBERON:0002036!2.62e-08!61;UBERON:0003082!2.62e-08!61;UBERON:0000055!4.30e-08!69;UBERON:0004111!5.98e-08!241;UBERON:0002385!9.92e-08!63;UBERON:0001015!9.92e-08!63;UBERON:0000383!9.92e-08!63;UBERON:0000914!1.02e-07!83;UBERON:0002329!1.02e-07!83;UBERON:0003077!1.02e-07!83;UBERON:0003059!1.02e-07!83;UBERON:0007282!1.02e-07!83;UBERON:0009618!1.02e-07!83;UBERON:0007285!1.02e-07!83;UBERON:0004872!1.44e-07!84;UBERON:0000481!2.97e-07!347;UBERON:0001869!6.84e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.96e-11;33!UBERON:0004571;1.96e-11;33!UBERON:0001637;4.51e-09;42!UBERON:0003509;4.51e-09;42!UBERON:0004572;4.51e-09;42!UBERON:0001869;6.41e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.82e-13,33;UBERON:0004571,2.82e-13,33;UBERON:0000025,9.99e-13,192;UBERON:0001637,6.83e-12,42;UBERON:0003509,6.83e-12,42;UBERON:0004572,6.83e-12,42;UBERON:0003914,2.93e-11,117;UBERON:0000483,3.81e-11,306;UBERON:0000119,3.82e-11,309;UBERON:0007500,1.00e-09,59;UBERON:0001981,1.00e-09,59;UBERON:0004537,1.00e-09,59;UBERON:0006965,1.00e-09,59;UBERON:0007503,1.09e-09,78;UBERON:0004872,1.57e-09,83;UBERON:0000055,8.45e-09,68;UBERON:0002049,1.24e-08,78;UBERON:0007798,1.24e-08,78;UBERON:0004111,1.80e-08,240;UBERON:0003077,4.51e-08,72;UBERON:0007285,4.51e-08,72;UBERON:0001869,4.55e-08,32;UBERON:0007524,8.03e-08,73;UBERON:0002329,1.32e-07,71;UBERON:0003059,1.32e-07,71;UBERON:0007282,1.32e-07,71;UBERON:0004290,1.32e-07,71;UBERON:0009618,1.32e-07,71;UBERON:0001134,1.68e-07,62;UBERON:0002036,1.68e-07,62;UBERON:0003082,1.68e-07,62;UBERON:0001893,2.99e-07,34;UBERON:0003528,3.94e-07,34;UBERON:0002020,3.94e-07,34;UBERON:0004535,4.63e-07,109;UBERON:0002791,5.33e-07,32;UBERON:0002385,5.43e-07,64;UBERON:0001015,5.43e-07,64;UBERON:0000383,5.43e-07,64;UBERON:0000486,9.50e-07,83 | |||
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| |||
|short_description=p5@VARS | |||
}} |
Latest revision as of 23:57, 17 September 2015
Short description: | p5@VARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000440048_5end |
EntrezGene: | VARS |
HGNC: | 12651 |
UniProt: | A2ABF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.38e-11 | 32 |
smooth muscle cell | 2.48e-10 | 43 |
smooth muscle myoblast | 2.48e-10 | 43 |
muscle cell | 2.25e-08 | 55 |
muscle precursor cell | 5.07e-08 | 58 |
myoblast | 5.07e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.07e-08 | 58 |
mesodermal cell | 3.79e-07 | 121 |