FFCP PHASE1:Hg19::chr5:43040412..43040434,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389289 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=33463 | |||
|TSSclassifier=strong | |||
|UniProt=Q3ZCQ2 | |||
|association_with_transcript=12bp_to_NM_001014279,uc003jnf.2_5end | |||
|cluster_id=chr5:43040412..43040434,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_C5orf39_5end | |||
|id=chr5:43040412..43040434,- | |||
|ontology_enrichment_celltype=CL:0000037!4.35e-24!172;CL:0000566!4.35e-24!172;CL:0000988!1.15e-23!182;CL:0000738!1.36e-23!140;CL:0002032!4.64e-21!165;CL:0000837!4.64e-21!165;CL:0002087!6.56e-21!119;CL:0002031!3.26e-20!124;CL:0000838!5.84e-20!52;CL:0000542!3.65e-19!53;CL:0000051!3.65e-19!53;CL:0000084!1.95e-17!25;CL:0000827!1.95e-17!25;CL:0000791!3.62e-15!18;CL:0000789!3.62e-15!18;CL:0002420!3.62e-15!18;CL:0002419!3.62e-15!18;CL:0000790!3.62e-15!18;CL:0000625!5.09e-10!11;CL:0000236!1.41e-07!14;CL:0000115!4.58e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.42e-26;25!CL:0000791;1.86e-25;18!CL:0000789;1.86e-25;18!CL:0002419;1.86e-25;18!CL:0000542;2.82e-19;53!CL:0000625;2.11e-16;11!CL:0000236;1.42e-11;13!CL:0000624;1.07e-09;6!CL:0002087;3.28e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.71e-32,52;CL:0000542,2.07e-31,53;CL:0000051,2.07e-31,53;CL:0000738,9.52e-31,136;CL:0000037,8.43e-29,168;CL:0002087,1.19e-27,115;CL:0000988,7.13e-27,177;CL:0000084,1.40e-26,25;CL:0000827,1.40e-26,25;CL:0000791,1.94e-25,18;CL:0000789,1.94e-25,18;CL:0002420,1.94e-25,18;CL:0002419,1.94e-25,18;CL:0000790,1.94e-25,18;CL:0002031,3.52e-25,120;CL:0002032,7.19e-25,161;CL:0000837,7.19e-25,161;CL:0000625,2.16e-16,11;CL:0000236,1.64e-10,14;CL:0000624,1.08e-09,6;CL:0000945,8.97e-07,24;CL:0000826,8.97e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.86e-25;18!CL:0000051;2.82e-19;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.60e-11!112;UBERON:0002390!4.28e-10!102;UBERON:0003061!4.28e-10!102;UBERON:0007023!4.49e-09!115;UBERON:0000178!1.12e-07!15;UBERON:0000179!1.12e-07!15;UBERON:0000463!1.12e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.36e-11;15!UBERON:0000179;3.36e-11;15!UBERON:0000463;3.36e-11;15!UBERON:0002390;3.63e-09;32!UBERON:0002193;4.52e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.65e-14,108;UBERON:0002390,7.13e-12,98;UBERON:0003061,7.13e-12,98;UBERON:0000178,3.24e-11,15;UBERON:0000179,3.24e-11,15;UBERON:0000463,3.24e-11,15;UBERON:0002405,6.14e-08,93 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,9.04737836752479,30.706351847777,4.18003532953405,0,0,0,1.39440961044543,0,2.05520307534393,3.87796785972314,4.8130667392834,4.77423915574874,1.56740831967947,3.88672399222775,0.515151135268373,0,0,0,0.232429036905685,0,0.309706370895104,0.575384784644301,2.0492856522328,1.41889337933151,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0.674170453335254,1.22433556948361,1.28371610830437,0,0.989553900560148,3.98927315243264,3.40979800426155,0.580418477257168,1.13477044938228,0,1.25624332628372,1.5644487552606,4.56096573880745,1.81619850790011,1.84138817993782,0.632924774881769,0,0.425208599930087,0.419317291016752,0.22465726229299,0.300353785683013,0,3.42015292489498,0.79566670879636,0.730656615058536,17.5996244461323,21.8455444504853,21.3482220927253,10.2415253415962,16.0158394814405,14.3688109988621,13.8819423284821,14.3108063180305,17.6456020423929,13.5064553555316,10.3213771593812,1.32171328579026,12.3311883855938,0.263384084775077,27.3426580458228,24.3666672904482,32.4850368419225,32.2669936104009,85.3916338580007,71.4906186659447,56.4997512382943,18.605546299824,45.6639156585998,33.894685871294,28.4344056953266,26.7710858226661,28.0928190729337,19.7325485524411,27.6350017785848,20.2862160014537,56.348894001583,43.3416141505335,48.0863409502893,19.9424443147716,67.0635863803362,52.2313717133597,27.5791464301258,55.4303820923928,55.993177031652,65.5811910669378,32.9759510780322,38.2679967351711,37.4792179657038,46.4083414006273,63.2268557629206,33.2651126320809,21.1277754668971,25.923568295021,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,0.851363990735132,0,0,0,0.348259474598534,0.398873881556595,0.476981248610684,0.571994910780128,1.48583000531826,0,0.860234595106124,0.347140501607594,0,0,1.37559020970034,0.417989933073621,8.0109195342492,4.26919515224052,2.67776490211736,1.20848795132744,1.52054421143703,0.976248230192678,1.10298924103761,0.81014194788176,3.39338967479503,2.02076435363553,0.900891843866578,0,0.949265659568129,0.549605231791222,0,11.6334079244498,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,14.0249536378683,1.40241773803446,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,1.58803092537181,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704387472105808,1.65862492432618,1.44119953416961,2.90357596880674,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,5.38008691168931,22.0674451426158,24.1502883842659,23.7434617117535,0,0,0,0,0,0,0,2.07207756718018,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,11.9925455151275,12.7271378482984,13.6611273988409,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0,0,0,0.784349769176855,0,0.105551628892876,9.09867072567173,9.18506008493184,1.51141141271498,1.54227252690289,0,0,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0,0.328014645699706,0,1.13345112812495,0.0915694648183434,0.660075999364704,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,1.15755106853338,0,0,0.92947049429925,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,1.34060455107157,0,0.941438007767792,0,0,0.443430153536676,0,11.6712950123399,9.1756464857085,10.2536493691349,14.7703700783829,20.9794759273959,9.07862635669804,5.94034580961926,10.3106272918255,0.106824071127473,0,0.245040215981032,0,0.721346064882224,3.62823401076912,5.10164072732231,5.9873811429845,0.957526850661834,0.211673582723883,1.29848776109822,16.8478306868075,6.61880569196257,0,0,0,0.1605880751037,0.403599414382095,0.851692475380653,0.343505344755765,1.84344458585075,1.3420566473545,1.50164227540718,1.75849285861836,0,0,0,2.33150377598474,1.4098700508785,0,2.3441308683503,0,1.5602073798847,0.284136146806413,0.47748896947538,0,0,0.994147647766298,0.140669416410513,0,0.16480387422676,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,1.1837208676432,26.3431401581634,0,0.969332746095218,0.278304294485554,0,0,0.262379999988587,2.89999830173917,0,0,0.236387681767936,0.689486746482929,0.583209226766509,0.347249989866585,0,0,0,0.221158519862449,0,0,1.0893846351899,0,1.84680620409113,0,0.23056390438806,0.0897576444097721,0,0,0,0,11.241262801531,0,0,0,0.19606253431774,0,0.569261198172555,0.158936578980379,0.210998064528027,0.979396848954886,0.282706142867882,0,0,1.41532103205343,4.27721101453538,0,0.2471278778930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| |||
|short_description=p1@C5orf39 | |||
}} |
Latest revision as of 23:58, 17 September 2015
Short description: | p1@C5orf39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C5orf39_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 12bp_to_NM_001014279, uc003jnf.2_5end |
EntrezGene: | C5orf39 |
HGNC: | 33463 |
UniProt: | Q3ZCQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.71e-32 | 52 |
lymphocyte | 2.07e-31 | 53 |
common lymphoid progenitor | 2.07e-31 | 53 |
leukocyte | 9.52e-31 | 136 |
hematopoietic stem cell | 8.43e-29 | 168 |
nongranular leukocyte | 1.19e-27 | 115 |
hematopoietic cell | 7.13e-27 | 177 |
T cell | 1.40e-26 | 25 |
pro-T cell | 1.40e-26 | 25 |
mature alpha-beta T cell | 1.94e-25 | 18 |
alpha-beta T cell | 1.94e-25 | 18 |
immature T cell | 1.94e-25 | 18 |
mature T cell | 1.94e-25 | 18 |
immature alpha-beta T cell | 1.94e-25 | 18 |
hematopoietic lineage restricted progenitor cell | 3.52e-25 | 120 |
hematopoietic oligopotent progenitor cell | 7.19e-25 | 161 |
hematopoietic multipotent progenitor cell | 7.19e-25 | 161 |
CD8-positive, alpha-beta T cell | 2.16e-16 | 11 |
B cell | 1.64e-10 | 14 |
CD4-positive, alpha-beta T cell | 1.08e-09 | 6 |
lymphocyte of B lineage | 8.97e-07 | 24 |
pro-B cell | 8.97e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.65e-14 | 108 |
hematopoietic system | 7.13e-12 | 98 |
blood island | 7.13e-12 | 98 |
blood | 3.24e-11 | 15 |
haemolymphatic fluid | 3.24e-11 | 15 |
organism substance | 3.24e-11 | 15 |
immune system | 6.14e-08 | 93 |