FFCP PHASE1:Hg19::chr6:31763316..31763327,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:31763316..31763327,- to FFCP PHASE1:Hg19::chr6:31763316..31763327,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7407 | |EntrezGene=7407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12651 | |HGNC=12651 | ||
|TSSclassifier=strong | |||
|UniProt=A2ABF4 | |UniProt=A2ABF4 | ||
|association_with_transcript=-40bp_to_ENST00000440048_5end | |||
|cluster_id=chr6:31763316..31763327,- | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_7_at_VARS_5end | |||
|id=chr6:31763316..31763327,- | |||
|ontology_enrichment_celltype=CL:0000548!4.59e-15!679;CL:0000004!4.59e-15!679;CL:0000255!4.59e-15!679;CL:0000012!9.32e-15!682;CL:0000183!1.52e-14!59;CL:0002371!3.96e-14!591;CL:0000055!1.79e-13!180;CL:0000680!5.66e-13!57;CL:0000056!5.66e-13!57;CL:0000355!5.66e-13!57;CL:0000187!7.55e-13!54;CL:0000144!1.17e-12!625;CL:0000192!5.93e-12!42;CL:0000514!5.93e-12!42;CL:0000393!3.46e-11!60;CL:0000211!3.46e-11!60;CL:0000003!4.52e-11!722;CL:0000359!1.47e-09!32;CL:0000222!3.02e-08!119;CL:0000220!1.17e-07!246;CL:0002321!1.56e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000192;7.19e-11;43!CL:0000359;2.85e-09;32!CL:0000187;5.53e-09;55!CL:0000393;2.42e-08;61!CL:0000211;2.42e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,7.85e-17,55;CL:0000680,2.05e-15,58;CL:0000056,2.05e-15,58;CL:0000355,2.05e-15,58;CL:0000192,2.88e-15,43;CL:0000514,2.88e-15,43;CL:0000393,3.78e-14,61;CL:0000211,3.78e-14,61;CL:0000359,2.57e-10,32;CL:0000222,5.91e-09,121;CL:0002321,3.53e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;7.19e-11;43!CL:0000355;3.68e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.74e-14!83;UBERON:0002329!1.74e-14!83;UBERON:0003077!1.74e-14!83;UBERON:0003059!1.74e-14!83;UBERON:0007282!1.74e-14!83;UBERON:0009618!1.74e-14!83;UBERON:0007285!1.74e-14!83;UBERON:0004290!1.39e-12!70;UBERON:0000486!3.90e-11!82;UBERON:0001134!4.69e-11!61;UBERON:0002036!4.69e-11!61;UBERON:0003082!4.69e-11!61;UBERON:0002385!5.96e-11!63;UBERON:0001015!5.96e-11!63;UBERON:0000383!5.96e-11!63;UBERON:0005256!1.18e-10!143;UBERON:0002049!5.20e-09!79;UBERON:0007798!5.20e-09!79;UBERON:0000490!2.59e-08!138;UBERON:0001637!3.32e-08!42;UBERON:0003509!3.32e-08!42;UBERON:0004572!3.32e-08!42;UBERON:0002100!1.03e-07!216;UBERON:0005085!2.50e-07!29;UBERON:0003104!2.78e-07!238;UBERON:0009142!2.78e-07!238;UBERON:0000055!8.07e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;1.28e-07;14!UBERON:0000019;1.74e-07;19!UBERON:0000047;1.74e-07;19!UBERON:0004088;1.74e-07;19!UBERON:0010230;1.74e-07;19!UBERON:0000970;5.88e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.20e-17,78;UBERON:0002329,1.10e-14,71;UBERON:0003059,1.10e-14,71;UBERON:0007282,1.10e-14,71;UBERON:0004290,1.10e-14,71;UBERON:0009618,1.10e-14,71;UBERON:0003077,2.52e-14,72;UBERON:0007285,2.52e-14,72;UBERON:0007524,5.67e-14,73;UBERON:0001134,9.34e-14,62;UBERON:0002036,9.34e-14,62;UBERON:0003082,9.34e-14,62;UBERON:0002385,5.20e-13,64;UBERON:0001015,5.20e-13,64;UBERON:0000383,5.20e-13,64;UBERON:0003104,3.79e-12,160;UBERON:0009142,3.79e-12,160;UBERON:0000486,9.44e-12,83;UBERON:0000490,1.55e-10,148;UBERON:0005256,2.55e-10,122;UBERON:0005085,3.67e-09,31;UBERON:0000119,4.13e-08,309;UBERON:0000483,5.87e-08,306;UBERON:0003914,7.16e-08,117;UBERON:0002049,9.09e-08,78;UBERON:0007798,9.09e-08,78;UBERON:0001801,1.40e-07,14;UBERON:0002100,2.43e-07,199;UBERON:0000019,6.77e-07,20;UBERON:0000047,6.77e-07,20;UBERON:0010312,6.77e-07,20;UBERON:0004088,6.77e-07,20;UBERON:0010230,6.77e-07,20;UBERON:0003072,6.77e-07,20;UBERON:0004128,6.77e-07,20;UBERON:0003071,6.77e-07,20;UBERON:0001637,7.07e-07,42;UBERON:0003509,7.07e-07,42;UBERON:0004572,7.07e-07,42;UBERON:0007500,9.72e-07,59;UBERON:0001981,9.72e-07,59;UBERON:0004537,9.72e-07,59;UBERON:0006965,9.72e-07,59 | |||
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| ||
|short_description=p7@VARS | |||
}} | }} |
Latest revision as of 23:58, 17 September 2015
Short description: | p7@VARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_VARS_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | -40bp_to_ENST00000440048_5end |
EntrezGene: | VARS |
HGNC: | 12651 |
UniProt: | A2ABF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 7.85e-17 | 55 |
muscle precursor cell | 2.05e-15 | 58 |
myoblast | 2.05e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.05e-15 | 58 |
smooth muscle cell | 2.88e-15 | 43 |
smooth muscle myoblast | 2.88e-15 | 43 |
electrically responsive cell | 3.78e-14 | 61 |
electrically active cell | 3.78e-14 | 61 |
vascular associated smooth muscle cell | 2.57e-10 | 32 |
mesodermal cell | 5.91e-09 | 121 |
embryonic cell | 3.53e-07 | 250 |