FFCP PHASE1:Hg19::chr6:31763721..31763734,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7407 | |EntrezGene=7407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12651 | |HGNC=12651 | ||
|TSSclassifier=strong | |||
|UniProt=P26640 | |UniProt=P26640 | ||
|association_with_transcript=0bp_to_ENST00000375663_5end | |association_with_transcript=0bp_to_ENST00000375663_5end | ||
|cluster_id=chr6:31763721..31763734,- | |||
|description=CAGE_peak_2_at_VARS_5end | |description=CAGE_peak_2_at_VARS_5end | ||
|id=chr6:31763721..31763734,- | |id=chr6:31763721..31763734,- | ||
|ontology_enrichment_celltype=CL:0000066!3.45e-07!254 | |ontology_enrichment_celltype=CL:0000066!3.45e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.50e-11!312;UBERON:0000483!3.86e-11!309;UBERON:0003056!5.78e-10!61;UBERON:0000481!6.35e-09!347;UBERON:0003075!2.89e-08!86;UBERON:0007284!2.89e-08!86;UBERON:0000064!3.13e-08!219;UBERON:0002346!2.11e-07!90;UBERON:0001893!2.69e-07!34;UBERON:0000025!3.74e-07!194;UBERON:0000475!5.01e-07!365;UBERON:0003080!5.51e-07!42;UBERON:0002791!5.97e-07!33;UBERON:0001869!8.89e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.24e-10,61;UBERON:0001893,5.06e-08,34;UBERON:0002780,1.26e-07,41;UBERON:0001890,1.26e-07,41;UBERON:0003080,1.26e-07,41;UBERON:0006240,1.26e-07,41;UBERON:0000483,1.69e-07,306;UBERON:0002791,2.15e-07,32;UBERON:0000119,2.27e-07,309;UBERON:0001869,2.40e-07,32;UBERON:0001950,7.83e-07,20 | |||
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| ||
|short_description=p2@VARS | |short_description=p2@VARS | ||
}} | }} |
Latest revision as of 00:05, 18 September 2015
Short description: | p2@VARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375663_5end |
EntrezGene: | VARS |
HGNC: | 12651 |
UniProt: | P26640 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 3.24e-10 | 61 |
telencephalon | 5.06e-08 | 34 |
regional part of forebrain | 1.26e-07 | 41 |
forebrain | 1.26e-07 | 41 |
anterior neural tube | 1.26e-07 | 41 |
future forebrain | 1.26e-07 | 41 |
epithelium | 1.69e-07 | 306 |
regional part of telencephalon | 2.15e-07 | 32 |
cell layer | 2.27e-07 | 309 |
cerebral hemisphere | 2.40e-07 | 32 |
neocortex | 7.83e-07 | 20 |