FFCP PHASE1:Hg19::chr19:40195084..40195100,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56891 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30054 | |||
|TSSclassifier=strong | |||
|UniProt=A8MPV8,Q8TCE9,B2R530 | |||
|association_with_transcript=138bp_to_ENST00000360675,ENST00000392052,NM_020129,NM_203471,uc002omf.2,uc002omg.2_5end | |||
|cluster_id=chr19:40195084..40195100,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_2_at_LGALS14_5end | |||
|id=chr19:40195084..40195100,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.30e-24!3;CL:0000945!2.93e-19!24;CL:0000826!2.93e-19!24;CL:0000838!1.63e-10!52;CL:0000542!2.73e-10!53;CL:0000051!2.73e-10!53;CL:0000946!5.31e-09!1;CL:0000786!5.31e-09!1;CL:0000980!5.31e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0002541;5.88e-66;3!CL:0000349;4.37e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.71e-66,3;CL:0000349,4.22e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.07e-23;1 | |||
|ontology_enrichment_disease=DOID:0060058!2.50e-12!10;DOID:630!2.82e-09!1;DOID:0050177!2.82e-09!1;DOID:0050427!2.82e-09!1;DOID:2355!8.49e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:630;5.13e-23;1!DOID:0050177;5.13e-23;1!DOID:0050427;5.13e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.13e-23,1;DOID:0050177,5.13e-23,1;DOID:0050427,5.13e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.30e-24!3;UBERON:0000920!1.30e-24!3;UBERON:0003124!1.32e-18!7;UBERON:0000478!2.47e-11!24;UBERON:0005631!2.21e-09!14;UBERON:0000158!2.21e-09!14;UBERON:0002372!1.07e-08!1;UBERON:0001961!1.07e-08!1;UBERON:0001744!1.07e-08!1;UBERON:0001735!1.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.88e-66;3!UBERON:0000920;5.88e-66;3!UBERON:0005631;2.04e-20;10!UBERON:0000158;2.04e-20;10!UBERON:0000478;3.96e-15;24!UBERON:0001987;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.71e-66,3;UBERON:0003124,1.50e-50,7;UBERON:0005631,1.35e-25,14;UBERON:0000158,1.35e-25,14;UBERON:0000478,3.82e-15,24;UBERON:0001987,6.50e-07,4;UBERON:0004340,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.472264687882075,0,0,0,0,0,0,0.0774672005803016,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5541708886351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.7954014128375,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,1.1249555075237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5950057986596,4.1218917030838,8.52855641629816,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.4240068659523,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50909195193158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |||
|short_description=p2@LGALS14 | |||
}} |
Latest revision as of 00:14, 18 September 2015
Short description: | p2@LGALS14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LGALS14_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 138bp_to_ENST00000360675, ENST00000392052, NM_020129, NM_203471, uc002omf.2, uc002omg.2_5end |
EntrezGene: | LGALS14 |
HGNC: | 30054 |
UniProt: | A8MPV8Q8TCE9B2R530 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.71e-66 | 3 |
extraembryonic cell | 4.22e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.71e-66 | 3 |
chorion | 1.50e-50 | 7 |
extraembryonic membrane | 1.35e-25 | 14 |
membranous layer | 1.35e-25 | 14 |
extraembryonic structure | 3.82e-15 | 24 |
placenta | 6.50e-07 | 4 |
allantois | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.13e-23 | 1 |
monogenic disease | 5.13e-23 | 1 |
xeroderma pigmentosum | 5.13e-23 | 1 |