FFCP PHASE1:Hg19::chr11:44625962..44625976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3732 | |EntrezGene=3732 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6210 | |HGNC=6210 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000530931_5end | |association_with_transcript=-1bp_to_ENST00000530931_5end | ||
|cluster_id=chr11:44625962..44625976,+ | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_3_at_CD82_5end | |description=CAGE_peak_3_at_CD82_5end | ||
|id=chr11:44625962..44625976,+ | |id=chr11:44625962..44625976,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.95e-46!24;CL:0000826!3.95e-46!24;CL:0000236!3.38e-41!14;CL:0000542!2.54e-23!53;CL:0000051!2.54e-23!53;CL:0000838!2.60e-21!52;CL:0002087!9.01e-15!119;CL:0000738!5.05e-14!140;CL:0000842!4.06e-12!3;CL:0000037!3.01e-10!172;CL:0000566!3.01e-10!172;CL:0000988!2.39e-09!182;CL:0000224!3.34e-09!4;CL:0002031!3.40e-09!124;CL:0002032!2.84e-07!165;CL:0000837!2.84e-07!165 | |ontology_enrichment_celltype=CL:0000945!3.95e-46!24;CL:0000826!3.95e-46!24;CL:0000236!3.38e-41!14;CL:0000542!2.54e-23!53;CL:0000051!2.54e-23!53;CL:0000838!2.60e-21!52;CL:0002087!9.01e-15!119;CL:0000738!5.05e-14!140;CL:0000842!4.06e-12!3;CL:0000037!3.01e-10!172;CL:0000566!3.01e-10!172;CL:0000988!2.39e-09!182;CL:0000224!3.34e-09!4;CL:0002031!3.40e-09!124;CL:0002032!2.84e-07!165;CL:0000837!2.84e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.14e-91;13!CL:0000945;1.17e-76;24!CL:0000542;1.40e-26;53!CL:0000785;1.06e-09;1!CL:0000819;1.06e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.05e-85,14;CL:0000945,1.11e-76,24;CL:0000826,1.11e-76,24;CL:0000838,4.80e-34,52;CL:0000542,2.35e-33,53;CL:0000051,2.35e-33,53;CL:0002087,8.23e-14,115;CL:0002031,3.95e-13,120;CL:0000738,2.77e-11,136;CL:0000819,1.06e-09,1;CL:0002032,3.97e-09,161;CL:0000837,3.97e-09,161;CL:0000037,1.23e-08,168;CL:0000988,4.58e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.40e-26;53!UBERON:0001045;1.06e-09;1 | |||
|ontology_enrichment_disease=DOID:0060058!7.10e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.48e-14;10!DOID:0060073;1.06e-09;1!DOID:8675;1.06e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.48e-14,10;DOID:0060073,1.06e-09,1;DOID:8675,1.06e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.71e-24!15;UBERON:0000179!4.71e-24!15;UBERON:0000463!4.71e-24!15;UBERON:0007023!1.41e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.06e-09;1!UBERON:0001153;1.06e-09;1!UBERON:0009854;1.06e-09;1!UBERON:0002372;1.76e-09;1!UBERON:0000029;1.76e-09;1!UBERON:0001961;1.76e-09;1!UBERON:0001744;1.76e-09;1!UBERON:0001042;1.76e-09;1!UBERON:0001735;1.76e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.15e-09,1;UBERON:0001153,1.15e-09,1;UBERON:0001045,1.15e-09,1;UBERON:0000029,1.62e-09,1;UBERON:0002372,1.76e-09,1;UBERON:0001961,1.76e-09,1;UBERON:0001744,1.76e-09,1;UBERON:0001735,1.76e-09,1 | |||
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| ||
|short_description=p3@CD82 | |short_description=p3@CD82 | ||
}} | }} |
Latest revision as of 00:34, 18 September 2015
Short description: | p3@CD82 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD82_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | -1bp_to_ENST00000530931_5end |
EntrezGene: | CD82 |
HGNC: | 6210 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.05e-85 | 14 |
lymphocyte of B lineage | 1.11e-76 | 24 |
pro-B cell | 1.11e-76 | 24 |
lymphoid lineage restricted progenitor cell | 4.80e-34 | 52 |
lymphocyte | 2.35e-33 | 53 |
common lymphoid progenitor | 2.35e-33 | 53 |
nongranular leukocyte | 8.23e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.95e-13 | 120 |
leukocyte | 2.77e-11 | 136 |
B-1 B cell | 1.06e-09 | 1 |
hematopoietic oligopotent progenitor cell | 3.97e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.97e-09 | 161 |
hematopoietic stem cell | 1.23e-08 | 168 |
hematopoietic cell | 4.58e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.15e-09 | 1 |
caecum | 1.15e-09 | 1 |
midgut | 1.15e-09 | 1 |
lymph node | 1.62e-09 | 1 |
tonsil | 1.76e-09 | 1 |
mucosa-associated lymphoid tissue | 1.76e-09 | 1 |
lymphoid tissue | 1.76e-09 | 1 |
tonsillar ring | 1.76e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.48e-14 | 10 |
lymphatic system cancer | 1.06e-09 | 1 |
lymphosarcoma | 1.06e-09 | 1 |