FFCP PHASE1:Hg19::chr1:40627028..40627037,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6018 | |EntrezGene=6018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10025 | |HGNC=10025 | ||
|TSSclassifier=strong | |||
|UniProt=Q13129 | |UniProt=Q13129 | ||
|association_with_transcript=-3bp_to_NM_012421,uc001cfc.3_5end | |association_with_transcript=-3bp_to_NM_012421,uc001cfc.3_5end | ||
|cluster_id=chr1:40627028..40627037,+ | |||
|description=CAGE_peak_2_at_RLF_5end | |description=CAGE_peak_2_at_RLF_5end | ||
|id=chr1:40627028..40627037,+ | |id=chr1:40627028..40627037,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.59e-13!172;CL:0000566!1.59e-13!172;CL:0000763!3.01e-13!112;CL:0000049!3.01e-13!112;CL:0000988!2.81e-12!182;CL:0002032!3.96e-12!165;CL:0000837!3.96e-12!165;CL:0000738!2.38e-11!140;CL:0002057!4.61e-11!42;CL:0000766!5.18e-11!76;CL:0000557!2.64e-10!71;CL:0000860!1.22e-09!45;CL:0000839!3.30e-09!70;CL:0002031!8.27e-09!124;CL:0002009!5.70e-08!65;CL:0002087!3.15e-07!119;CL:0002194!3.44e-07!63;CL:0000576!3.44e-07!63;CL:0000040!3.44e-07!63;CL:0000559!3.44e-07!63 | |ontology_enrichment_celltype=CL:0000037!1.59e-13!172;CL:0000566!1.59e-13!172;CL:0000763!3.01e-13!112;CL:0000049!3.01e-13!112;CL:0000988!2.81e-12!182;CL:0002032!3.96e-12!165;CL:0000837!3.96e-12!165;CL:0000738!2.38e-11!140;CL:0002057!4.61e-11!42;CL:0000766!5.18e-11!76;CL:0000557!2.64e-10!71;CL:0000860!1.22e-09!45;CL:0000839!3.30e-09!70;CL:0002031!8.27e-09!124;CL:0002009!5.70e-08!65;CL:0002087!3.15e-07!119;CL:0002194!3.44e-07!63;CL:0000576!3.44e-07!63;CL:0000040!3.44e-07!63;CL:0000559!3.44e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-10;33!CL:0002057;1.60e-10;33!CL:0000081;3.37e-09;11!CL:0000766;1.99e-08;69!CL:0000094;1.12e-07;8!CL:0000576;2.86e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.19e-17,108;CL:0000049,4.19e-17,108;CL:0000766,1.10e-16,72;CL:0000988,7.25e-15,177;CL:0000037,9.05e-15,168;CL:0000557,1.33e-14,67;CL:0000738,6.50e-14,136;CL:0002032,8.43e-13,161;CL:0000837,8.43e-13,161;CL:0000839,2.64e-11,66;CL:0002009,2.25e-10,61;CL:0000860,1.74e-09,42;CL:0002057,1.74e-09,42;CL:0000081,2.28e-09,11;CL:0002194,8.11e-09,59;CL:0000576,8.11e-09,59;CL:0000040,8.11e-09,59;CL:0000559,8.11e-09,59;CL:0002031,1.24e-08,120;CL:0000094,8.56e-08,8;CL:0000473,1.13e-07,48;CL:0000234,1.13e-07,48;CL:0002087,4.54e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!4.13e-08!86;UBERON:0002371!4.54e-08!80;UBERON:0007023!2.21e-07!115;UBERON:0002390!2.65e-07!102;UBERON:0003061!2.65e-07!102;UBERON:0001049!5.15e-07!57;UBERON:0005068!5.15e-07!57;UBERON:0006241!5.15e-07!57;UBERON:0007135!5.15e-07!57;UBERON:0004765!7.25e-07!101;UBERON:0001434!7.25e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.37e-12,76;UBERON:0002390,3.34e-11,98;UBERON:0003061,3.34e-11,98;UBERON:0001474,2.19e-10,82;UBERON:0002193,2.65e-09,108;UBERON:0004765,9.39e-09,90;UBERON:0002405,3.20e-08,93;UBERON:0001434,9.08e-08,100 | |||
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| ||
|short_description=p2@RLF | |short_description=p2@RLF | ||
}} | }} |
Latest revision as of 00:50, 18 September 2015
Short description: | p2@RLF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RLF_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_NM_012421, uc001cfc.3_5end |
EntrezGene: | RLF |
HGNC: | 10025 |
UniProt: | Q13129 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.19e-17 | 108 |
common myeloid progenitor | 4.19e-17 | 108 |
myeloid leukocyte | 1.10e-16 | 72 |
hematopoietic cell | 7.25e-15 | 177 |
hematopoietic stem cell | 9.05e-15 | 168 |
granulocyte monocyte progenitor cell | 1.33e-14 | 67 |
leukocyte | 6.50e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.43e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.43e-13 | 161 |
myeloid lineage restricted progenitor cell | 2.64e-11 | 66 |
macrophage dendritic cell progenitor | 2.25e-10 | 61 |
classical monocyte | 1.74e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.74e-09 | 42 |
blood cell | 2.28e-09 | 11 |
monopoietic cell | 8.11e-09 | 59 |
monocyte | 8.11e-09 | 59 |
monoblast | 8.11e-09 | 59 |
promonocyte | 8.11e-09 | 59 |
hematopoietic lineage restricted progenitor cell | 1.24e-08 | 120 |
granulocyte | 8.56e-08 | 8 |
defensive cell | 1.13e-07 | 48 |
phagocyte | 1.13e-07 | 48 |
nongranular leukocyte | 4.54e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.37e-12 | 76 |
hematopoietic system | 3.34e-11 | 98 |
blood island | 3.34e-11 | 98 |
bone element | 2.19e-10 | 82 |
hemolymphoid system | 2.65e-09 | 108 |
skeletal element | 9.39e-09 | 90 |
immune system | 3.20e-08 | 93 |
skeletal system | 9.08e-08 | 100 |