FFCP PHASE1:Hg19::chr5:50681985..50682031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3670 | |EntrezGene=3670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6132 | |HGNC=6132 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAK3 | |UniProt=D6RAK3 | ||
|association_with_transcript=-6bp_to_ENST00000505475_5end | |||
|cluster_id=chr5:50681985..50682031,+ | |||
|coexpression_cluster_id=C1737 | |||
|description=CAGE_peak_2_at_ISL1_5end | |||
|id=chr5:50681985..50682031,+ | |||
|ontology_enrichment_celltype=CL:0002150!4.46e-15!3;CL:0000861!4.46e-15!3;CL:0000242!8.17e-12!2;CL:0002622!1.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.61e-34;2!CL:0000123;5.04e-34;2!CL:0000242;5.04e-34;2!CL:0000312;1.60e-14;5!CL:0000333;1.83e-14;5!CL:0000240;2.45e-12;6!CL:0000311;2.45e-12;6!CL:0000079;2.45e-12;6!CL:0000237;2.45e-12;6!CL:0000362;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.61e-34,2;CL:0000242,5.04e-34,2;CL:0000312,1.60e-14,5;CL:0000240,2.45e-12,6;CL:0000311,2.45e-12,6;CL:0000079,2.45e-12,6;CL:0000237,2.45e-12,6;CL:0000036,2.45e-12,6;CL:0000357,2.45e-12,6;CL:0000114,2.45e-12,6;CL:0000362,1.12e-08,9;CL:0000333,3.05e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000357;2.45e-12;6!CL:0000114;2.45e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.40e-14;5!DOID:169;2.74e-12;6!DOID:171;6.56e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.40e-14,5;DOID:169,2.74e-12,6;DOID:171,6.56e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002367!4.32e-11!11;UBERON:0010147!4.32e-11!11;UBERON:0009846!4.32e-11!11;UBERON:0003353!4.32e-11!11;UBERON:0004902!4.32e-11!11;UBERON:0003820!4.32e-11!11;UBERON:0009847!4.32e-11!11;UBERON:0003937!3.80e-10!12;UBERON:0005399!3.80e-10!12;UBERON:0000162!1.16e-08!14;UBERON:0001353!1.16e-08!14;UBERON:0000163!1.16e-08!14;UBERON:0006866!1.16e-08!14;UBERON:0000164!1.16e-08!14;UBERON:0000931!1.16e-08!14;UBERON:0004122!4.56e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.61e-34;2!UBERON:0004801;3.61e-34;2!UBERON:0000013;1.83e-14;5!UBERON:0002410;1.83e-14;5!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0000010;1.21e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,3.61e-34,2;UBERON:0004801,3.61e-34,2;UBERON:0000013,1.83e-14,5;UBERON:0002410,1.83e-14,5;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0000010,1.21e-08,8 | |||
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|short_description=p2@ISL1 | |||
}} | }} |
Latest revision as of 02:00, 18 September 2015
Short description: | p2@ISL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ISL1_5end |
Coexpression cluster: | C1737_argyrophil_merkel_neuroblastoma_gastrointestinal_carcinoid_smallcell_small |
Association with transcript: | -6bp_to_ENST00000505475_5end |
EntrezGene: | ISL1 |
HGNC: | 6132 |
UniProt: | D6RAK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.61e-34 | 2 |
Merkel cell | 5.04e-34 | 2 |
keratinocyte | 1.60e-14 | 5 |
stratified squamous epithelial cell | 2.45e-12 | 6 |
keratin accumulating cell | 2.45e-12 | 6 |
stratified epithelial cell | 2.45e-12 | 6 |
keratinizing barrier epithelial cell | 2.45e-12 | 6 |
epithelial fate stem cell | 2.45e-12 | 6 |
stratified epithelial stem cell | 2.45e-12 | 6 |
surface ectodermal cell | 2.45e-12 | 6 |
epidermal cell | 1.12e-08 | 9 |
migratory neural crest cell | 3.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 3.61e-34 | 2 |
cervix epithelium | 3.61e-34 | 2 |
sympathetic nervous system | 1.83e-14 | 5 |
autonomic nervous system | 1.83e-14 | 5 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
peripheral nervous system | 1.21e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.40e-14 | 5 |
neuroendocrine tumor | 2.74e-12 | 6 |
neuroectodermal tumor | 6.56e-08 | 10 |