FFCP PHASE1:Hg19::chr17:77924675..77924686,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125058 | |EntrezGene=125058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28356 | |HGNC=28356 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DH7 | |UniProt=Q96DH7 | ||
|association_with_transcript=-19bp_to_uc002jxh.2,uc002jxi.2,uc002jxk.1_5end | |association_with_transcript=-19bp_to_uc002jxh.2,uc002jxi.2,uc002jxk.1_5end | ||
|cluster_id=chr17:77924675..77924686,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_3_at_TBC1D16_5end | |description=CAGE_peak_3_at_TBC1D16_5end | ||
|id=chr17:77924675..77924686,- | |id=chr17:77924675..77924686,- | ||
|ontology_enrichment_celltype=CL:0000148!3.07e-27!10;CL:0000541!3.07e-27!10;CL:0000147!6.20e-24!14;CL:0002567!3.97e-14!3;CL:0000710!6.65e-13!20;CL:0000075!3.43e-09!27;CL:0002322!4.04e-08!5;CL:0000325!1.76e-07!39;CL:0002077!2.87e-07!33 | |ontology_enrichment_celltype=CL:0000148!3.07e-27!10;CL:0000541!3.07e-27!10;CL:0000147!6.20e-24!14;CL:0002567!3.97e-14!3;CL:0000710!6.65e-13!20;CL:0000075!3.43e-09!27;CL:0002322!4.04e-08!5;CL:0000325!1.76e-07!39;CL:0002077!2.87e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.33e-107;10!CL:0000147;1.37e-76;14!CL:0002567;1.23e-66;3!CL:0000710;1.09e-53;20!CL:0000075;8.11e-40;27!CL:0002077;7.38e-28;34!CL:0002566;2.93e-23;1!CL:0000149;9.11e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.33e-107,10;CL:0000541,4.33e-107,10;CL:0000147,1.37e-76,14;CL:0002567,1.23e-66,3;CL:0000710,1.09e-53,20;CL:0000075,8.11e-40,27;CL:0002077,1.21e-31,34;CL:0000333,4.90e-25,41;CL:0002566,2.62e-23,1;CL:0000133,1.20e-17,59;CL:0000221,1.55e-14,72;CL:0000149,9.11e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.21e-09;59!CL:0000221;4.16e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!8.48e-10!2 | |ontology_enrichment_disease=DOID:1909!8.48e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;4.65e-44;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.65e-44,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.15e-37!57;UBERON:0005068!3.15e-37!57;UBERON:0006241!3.15e-37!57;UBERON:0007135!3.15e-37!57;UBERON:0005743!2.06e-36!86;UBERON:0001893!3.56e-33!34;UBERON:0001017!5.52e-33!82;UBERON:0000073!2.40e-32!94;UBERON:0001016!2.40e-32!94;UBERON:0002791!2.59e-30!33;UBERON:0002346!2.99e-30!90;UBERON:0002616!8.85e-30!59;UBERON:0003075!1.68e-29!86;UBERON:0007284!1.68e-29!86;UBERON:0002020!3.01e-29!34;UBERON:0003528!3.01e-29!34;UBERON:0001869!8.88e-28!32;UBERON:0002780!6.52e-27!41;UBERON:0001890!6.52e-27!41;UBERON:0006240!6.52e-27!41;UBERON:0000955!1.28e-26!69;UBERON:0006238!1.28e-26!69;UBERON:0003080!3.48e-26!42;UBERON:0007023!2.78e-22!115;UBERON:0003056!2.28e-21!61;UBERON:0002308!2.81e-21!9;UBERON:0000125!2.81e-21!9;UBERON:0009663!1.27e-20!7;UBERON:0000924!1.37e-18!173;UBERON:0006601!1.37e-18!173;UBERON:0004121!8.61e-18!169;UBERON:0000369!9.84e-17!4;UBERON:0002435!9.84e-17!4;UBERON:0000204!9.84e-17!4;UBERON:0010082!9.84e-17!4;UBERON:0002420!6.66e-16!9;UBERON:0007245!6.66e-16!9;UBERON:0010009!6.66e-16!9;UBERON:0010011!6.66e-16!9;UBERON:0000454!6.66e-16!9;UBERON:0002619!1.33e-15!22;UBERON:0000033!1.89e-15!123;UBERON:0000153!1.84e-14!129;UBERON:0007811!1.84e-14!129;UBERON:0001950!7.61e-14!20;UBERON:0000956!1.41e-13!25;UBERON:0000203!1.41e-13!25;UBERON:0005383!2.76e-13!3;UBERON:0005382!2.76e-13!3;UBERON:0002298!3.68e-12!8;UBERON:0003076!4.68e-12!15;UBERON:0003057!4.68e-12!15;UBERON:0000200!2.44e-11!6;UBERON:0001873!1.97e-09!2;UBERON:0010122!1.97e-09!2;UBERON:0004733!5.71e-08!12;UBERON:0002028!5.71e-08!12;UBERON:0007277!5.71e-08!12;UBERON:0001872!8.91e-08!5;UBERON:0004732!2.46e-07!13;UBERON:0000025!5.62e-07!194 | |ontology_enrichment_uberon=UBERON:0001049!3.15e-37!57;UBERON:0005068!3.15e-37!57;UBERON:0006241!3.15e-37!57;UBERON:0007135!3.15e-37!57;UBERON:0005743!2.06e-36!86;UBERON:0001893!3.56e-33!34;UBERON:0001017!5.52e-33!82;UBERON:0000073!2.40e-32!94;UBERON:0001016!2.40e-32!94;UBERON:0002791!2.59e-30!33;UBERON:0002346!2.99e-30!90;UBERON:0002616!8.85e-30!59;UBERON:0003075!1.68e-29!86;UBERON:0007284!1.68e-29!86;UBERON:0002020!3.01e-29!34;UBERON:0003528!3.01e-29!34;UBERON:0001869!8.88e-28!32;UBERON:0002780!6.52e-27!41;UBERON:0001890!6.52e-27!41;UBERON:0006240!6.52e-27!41;UBERON:0000955!1.28e-26!69;UBERON:0006238!1.28e-26!69;UBERON:0003080!3.48e-26!42;UBERON:0007023!2.78e-22!115;UBERON:0003056!2.28e-21!61;UBERON:0002308!2.81e-21!9;UBERON:0000125!2.81e-21!9;UBERON:0009663!1.27e-20!7;UBERON:0000924!1.37e-18!173;UBERON:0006601!1.37e-18!173;UBERON:0004121!8.61e-18!169;UBERON:0000369!9.84e-17!4;UBERON:0002435!9.84e-17!4;UBERON:0000204!9.84e-17!4;UBERON:0010082!9.84e-17!4;UBERON:0002420!6.66e-16!9;UBERON:0007245!6.66e-16!9;UBERON:0010009!6.66e-16!9;UBERON:0010011!6.66e-16!9;UBERON:0000454!6.66e-16!9;UBERON:0002619!1.33e-15!22;UBERON:0000033!1.89e-15!123;UBERON:0000153!1.84e-14!129;UBERON:0007811!1.84e-14!129;UBERON:0001950!7.61e-14!20;UBERON:0000956!1.41e-13!25;UBERON:0000203!1.41e-13!25;UBERON:0005383!2.76e-13!3;UBERON:0005382!2.76e-13!3;UBERON:0002298!3.68e-12!8;UBERON:0003076!4.68e-12!15;UBERON:0003057!4.68e-12!15;UBERON:0000200!2.44e-11!6;UBERON:0001873!1.97e-09!2;UBERON:0010122!1.97e-09!2;UBERON:0004733!5.71e-08!12;UBERON:0002028!5.71e-08!12;UBERON:0007277!5.71e-08!12;UBERON:0001872!8.91e-08!5;UBERON:0004732!2.46e-07!13;UBERON:0000025!5.62e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;9.64e-07;15!UBERON:0007376;9.64e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,9.64e-07,15;UBERON:0007376,9.64e-07,15;UBERON:0007383,9.64e-07,15 | |||
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| ||
|short_description=p3@TBC1D16 | |short_description=p3@TBC1D16 | ||
}} | }} |
Latest revision as of 02:55, 18 September 2015
Short description: | p3@TBC1D16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBC1D16_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -19bp_to_uc002jxh.2, uc002jxi.2, uc002jxk.1_5end |
EntrezGene: | TBC1D16 |
HGNC: | 28356 |
UniProt: | Q96DH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.33e-107 | 10 |
melanoblast | 4.33e-107 | 10 |
pigment cell | 1.37e-76 | 14 |
light melanocyte | 1.23e-66 | 3 |
neurecto-epithelial cell | 1.09e-53 | 20 |
columnar/cuboidal epithelial cell | 8.11e-40 | 27 |
ecto-epithelial cell | 1.21e-31 | 34 |
migratory neural crest cell | 4.90e-25 | 41 |
dark melanocyte | 2.62e-23 | 1 |
neurectodermal cell | 1.20e-17 | 59 |
ectodermal cell | 1.55e-14 | 72 |
visual pigment cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 9.64e-07 | 15 |
outer epithelium | 9.64e-07 | 15 |
enveloping layer of ectoderm | 9.64e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.65e-44 | 2 |