FFCP PHASE1:Hg19::chr21:33976741..33976754,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56683 | |EntrezGene=56683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1301 | |HGNC=1301 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_ENST00000483315,uc002yqa.3_5end | |association_with_transcript=68bp_to_ENST00000483315,uc002yqa.3_5end | ||
|cluster_id=chr21:33976741..33976754,- | |||
|coexpression_cluster_id=C171 | |coexpression_cluster_id=C171 | ||
|description=CAGE_peak_16_at_C21orf59_5end | |description=CAGE_peak_16_at_C21orf59_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!3.43e-13!5;CL:0000242!3.43e-09!2 | |ontology_enrichment_celltype=CL:0002322!3.43e-13!5;CL:0000242!3.43e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0000312;2.66e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000362;7.48e-07;9 | |ontology_enrichment_celltype_v019=CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0000312;2.66e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000362;7.48e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.32e-26,2;CL:0000312,2.66e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000362,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.68e-66;3!CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | |ontology_enrichment_development_v019=UBERON:0006215;4.68e-66;3!CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;3.26e-11;5 | |ontology_enrichment_disease_v019=DOID:4362;3.26e-11;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,3.26e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0004733!8.90e-32!12;UBERON:0002028!8.90e-32!12;UBERON:0007277!8.90e-32!12;UBERON:0004732!2.38e-29!13;UBERON:0002680!1.50e-27!9;UBERON:0001895!1.50e-27!9;UBERON:0010092!1.50e-27!9;UBERON:0003076!1.84e-25!15;UBERON:0003057!1.84e-25!15;UBERON:0002037!7.83e-24!6;UBERON:0006215!7.83e-24!6;UBERON:0002581!3.07e-16!1;UBERON:0001049!2.08e-12!57;UBERON:0005068!2.08e-12!57;UBERON:0006241!2.08e-12!57;UBERON:0007135!2.08e-12!57;UBERON:0002616!5.57e-12!59;UBERON:0000200!5.64e-11!6;UBERON:0001017!5.66e-11!82;UBERON:0005743!1.91e-10!86;UBERON:0000955!4.71e-10!69;UBERON:0006238!4.71e-10!69;UBERON:0000073!2.06e-09!94;UBERON:0001016!2.06e-09!94;UBERON:0002298!1.85e-08!8;UBERON:0003075!4.10e-08!86;UBERON:0007284!4.10e-08!86;UBERON:0002346!9.82e-08!90 | |ontology_enrichment_uberon=UBERON:0004733!8.90e-32!12;UBERON:0002028!8.90e-32!12;UBERON:0007277!8.90e-32!12;UBERON:0004732!2.38e-29!13;UBERON:0002680!1.50e-27!9;UBERON:0001895!1.50e-27!9;UBERON:0010092!1.50e-27!9;UBERON:0003076!1.84e-25!15;UBERON:0003057!1.84e-25!15;UBERON:0002037!7.83e-24!6;UBERON:0006215!7.83e-24!6;UBERON:0002581!3.07e-16!1;UBERON:0001049!2.08e-12!57;UBERON:0005068!2.08e-12!57;UBERON:0006241!2.08e-12!57;UBERON:0007135!2.08e-12!57;UBERON:0002616!5.57e-12!59;UBERON:0000200!5.64e-11!6;UBERON:0001017!5.66e-11!82;UBERON:0005743!1.91e-10!86;UBERON:0000955!4.71e-10!69;UBERON:0006238!4.71e-10!69;UBERON:0000073!2.06e-09!94;UBERON:0001016!2.06e-09!94;UBERON:0002298!1.85e-08!8;UBERON:0003075!4.10e-08!86;UBERON:0007284!4.10e-08!86;UBERON:0002346!9.82e-08!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.87e-34;6!UBERON:0002680;6.41e-23;9!UBERON:0001895;6.41e-23;9!UBERON:0004733;1.71e-17;12!UBERON:0002028;1.71e-17;12!UBERON:0004732;3.07e-16;13!UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6 | |ontology_enrichment_uberon_v019=UBERON:0002037;9.87e-34;6!UBERON:0002680;6.41e-23;9!UBERON:0001895;6.41e-23;9!UBERON:0004733;1.71e-17;12!UBERON:0002028;1.71e-17;12!UBERON:0004732;3.07e-16;13!UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.87e-34,6;UBERON:0006215,9.87e-34,6;UBERON:0002680,6.41e-23,9;UBERON:0001895,6.41e-23,9;UBERON:0010092,6.41e-23,9;UBERON:0004733,1.71e-17,12;UBERON:0002028,1.71e-17,12;UBERON:0007277,1.71e-17,12;UBERON:0004732,3.07e-16,13;UBERON:0003076,3.15e-14,15;UBERON:0003057,3.15e-14,15;UBERON:0000002,1.44e-09,6;UBERON:0001560,1.44e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,1.21637185924347,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,9.56478788831446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40363678077263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,1.21637185924347,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,9.56478788831446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40363678077263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@C21orf59 | |short_description=p16@C21orf59 | ||
}} | }} |
Latest revision as of 03:21, 18 September 2015
Short description: | p16@C21orf59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_C21orf59_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 68bp_to_ENST00000483315, uc002yqa.3_5end |
EntrezGene: | C21orf59 |
HGNC: | 1301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.32e-26 | 2 |
keratinocyte | 2.66e-11 | 5 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
epidermal cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.87e-34 | 6 |
rhombic lip | 9.87e-34 | 6 |
regional part of metencephalon | 6.41e-23 | 9 |
metencephalon | 6.41e-23 | 9 |
future metencephalon | 6.41e-23 | 9 |
segmental subdivision of hindbrain | 1.71e-17 | 12 |
hindbrain | 1.71e-17 | 12 |
presumptive hindbrain | 1.71e-17 | 12 |
segmental subdivision of nervous system | 3.07e-16 | 13 |
posterior neural tube | 3.15e-14 | 15 |
chordal neural plate | 3.15e-14 | 15 |
uterine cervix | 1.44e-09 | 6 |
neck of organ | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.26e-11 | 5 |