FFCP PHASE1:Hg19::chr5:54529415..54529468,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10309 | |EntrezGene=10309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18576 | |HGNC=18576 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000501463,uc003jpv.2_5end | |association_with_transcript=0bp_to_ENST00000501463,uc003jpv.2_5end | ||
|cluster_id=chr5:54529415..54529468,- | |||
|description=CAGE_peak_1_at_CCNO_5end | |description=CAGE_peak_1_at_CCNO_5end | ||
|id=chr5:54529415..54529468,- | |id=chr5:54529415..54529468,- | ||
|ontology_enrichment_celltype=CL:0000066!1.47e-25!254;CL:0002076!7.25e-12!43;CL:0000223!1.81e-08!59;CL:0000076!1.02e-07!62 | |ontology_enrichment_celltype=CL:0000066!1.47e-25!254;CL:0002076!7.25e-12!43;CL:0000223!1.81e-08!59;CL:0000076!1.02e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.96e-09;42!CL:0002368;4.40e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.56e-25,253;CL:0002076,2.45e-13,42;CL:0000223,6.94e-11,58;CL:0002368,3.75e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.85e-12;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.43e-25!143;DOID:305!2.79e-22!106;DOID:162!1.14e-17!235;DOID:14566!1.64e-17!239;DOID:299!9.24e-08!25;DOID:1749!9.98e-07!14 | |ontology_enrichment_disease=DOID:0050687!1.43e-25!143;DOID:305!2.79e-22!106;DOID:162!1.14e-17!235;DOID:14566!1.64e-17!239;DOID:299!9.24e-08!25;DOID:1749!9.98e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:299;4.19e-08;25!DOID:1749;2.67e-07;14!DOID:305;2.68e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.20e-26,143;DOID:305,3.21e-23,106;DOID:14566,5.83e-17,239;DOID:162,1.06e-16,235;DOID:299,5.06e-08,25;DOID:1749,2.55e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.77e-12!72;UBERON:0008947!4.90e-12!38;UBERON:0003258!4.90e-12!38;UBERON:0000065!6.13e-11!53;UBERON:0000475!1.06e-09!365;UBERON:0004119!1.48e-09!169;UBERON:0000925!1.48e-09!169;UBERON:0006595!1.48e-09!169;UBERON:0000464!2.62e-09!104;UBERON:0001041!1.09e-08!98;UBERON:0000072!1.82e-08!46;UBERON:0001007!2.00e-08!155;UBERON:0001555!2.00e-08!155;UBERON:0007026!2.00e-08!155;UBERON:0000077!3.18e-08!130;UBERON:0000915!1.22e-07!52;UBERON:0000062!1.52e-07!511;UBERON:0000064!1.58e-07!219;UBERON:0005153!2.01e-07!37;UBERON:0000481!2.24e-07!347;UBERON:0004921!4.00e-07!129;UBERON:0004185!4.00e-07!129;UBERON:0000153!7.52e-07!129;UBERON:0007811!7.52e-07!129;UBERON:0007023!7.98e-07!115;UBERON:0000924!8.51e-07!173;UBERON:0006601!8.51e-07!173 | |ontology_enrichment_uberon=UBERON:0001004!2.77e-12!72;UBERON:0008947!4.90e-12!38;UBERON:0003258!4.90e-12!38;UBERON:0000065!6.13e-11!53;UBERON:0000475!1.06e-09!365;UBERON:0004119!1.48e-09!169;UBERON:0000925!1.48e-09!169;UBERON:0006595!1.48e-09!169;UBERON:0000464!2.62e-09!104;UBERON:0001041!1.09e-08!98;UBERON:0000072!1.82e-08!46;UBERON:0001007!2.00e-08!155;UBERON:0001555!2.00e-08!155;UBERON:0007026!2.00e-08!155;UBERON:0000077!3.18e-08!130;UBERON:0000915!1.22e-07!52;UBERON:0000062!1.52e-07!511;UBERON:0000064!1.58e-07!219;UBERON:0005153!2.01e-07!37;UBERON:0000481!2.24e-07!347;UBERON:0004921!4.00e-07!129;UBERON:0004185!4.00e-07!129;UBERON:0000153!7.52e-07!129;UBERON:0007811!7.52e-07!129;UBERON:0007023!7.98e-07!115;UBERON:0000924!8.51e-07!173;UBERON:0006601!8.51e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;2.66e-11;44!UBERON:0000072;1.31e-09;37!UBERON:0001737;1.33e-07;9!UBERON:0001557;1.33e-07;9!UBERON:0001004;1.43e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,1.22e-13,38;UBERON:0003258,1.22e-13,38;UBERON:0001004,5.98e-13,74;UBERON:0000065,1.65e-11,54;UBERON:0004119,8.06e-09,160;UBERON:0000925,8.06e-09,160;UBERON:0006595,8.06e-09,160;UBERON:0000072,1.33e-08,47;UBERON:0001041,1.93e-08,87;UBERON:0011216,3.52e-08,223;UBERON:0005177,4.54e-08,101;UBERON:0001007,7.92e-08,145;UBERON:0001555,7.92e-08,145;UBERON:0007026,7.92e-08,145;UBERON:0005153,8.14e-08,37;UBERON:0001737,1.10e-07,9;UBERON:0000915,4.10e-07,52;UBERON:0004921,5.04e-07,118 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.422863212287913,2.00146596706261,0.446961094427288,0,0,0,0.522371256399677,0.491467873003018,4.18680700783456,0.436882744260345,0.263766978228454,0,0.994192127183747,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0.309632246632152,7.35536979583142,10.2410012384605,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0.12786256184353,2.53007406669196,3.00802746381534,2.89693037921647,0.795285947051099,4.86634870302636,0.567208902984407,0.886917589850256,1.14185221401064,1.83370705696798,2.18577172975525,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0.39752481473341,0.860234595106124,1.04142150482278,2.26123176769604,1.67799774483962,2.20094433552054,0.626984899610432,0,0,0.33472061276467,0,1.52054421143703,0,0,2.43042584364528,0.267899184852239,0.22452937262617,0.450445921933289,0,0,0.549605231791222,0,0,2.61656431285521,0,0.886413581652058,1.05927344650575,0,0.709336764396714,0,0,0.74000264525148,0,0.404132016209064,0,0,0,0,0.312160076830321,0,1.34503812496621,0,0,0,0,0,0.309977343527296,0,0.741800787835671,0,2.15585442544872,0,0,0.277064115484183,0,0.612975591598039,0.751190294532984,0,0.538168907066586,0.213557388818567,0.635795703478686,1.50045548042201,0.206105058476878,1.03056216018252,0.37223371266318,1.0126579934476,0,0.504867548488229,0.276149695926898,0,0,0.302256294682921,0.339121184620975,1.54608682530637,1.63647672354501,2.58124135850103,0.365921118388786,0.132529768321485,1.51052125730374,1.34759371519982,0,0.36497735907583,1.56449532329816,0,0,0.464367928031979,0,6.50687400219141,6.91197229320217,6.50729780685401,7.72057809126758,7.40790109914181,7.1181185733329,6.47190279168789,5.88664395376038,5.77120735419586,0,1.40241773803446,0,0,0,0,0,0,1.72183813960359,0.343135620597051,4.49976170175365,8.99214026060957,2.01057944823262,0.462942225792648,0,0,1.44331342025273,0.463721619900307,0.587043471179108,0,0,0.190254152234598,3.1608175918371,5.15091697256924,0,0,0,0.93733833986777,1.84780341018745,0.567100388969546,4.74660170325096,3.48760726216754,14.9519244874432,0,0,0.207328115540772,0.288239906833923,0.6312121671319,0.063497894292169,4.20187268114105,0,1.71072446022705,0,6.30720421472227,0,0,0,0.07333828582095,0.646358578788889,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.532844358032199,0,0,0.823240336780769,0,0,0,0.602878754119172,1.74306691720059,0.199945982364114,0,0,0,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.716243852959582,0.896681151948218,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0.601892199455438,9.09630016223939,1.03473071292505,0.664225598535437,0,0,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,1.38115775959256,0.280660094433074,0.512556597022804,1.53512174720011,0.482561763430822,0,0.308419387605311,0,0.0821271560138091,0.519254429183621,0.116210378459959,2.1754700926492,3.80962293576241,6.16942625870505,0,0,0.131124414959424,2.70719767744447,1.69433741629712,1.56869953835371,0,1.37217117560738,0,0.170093705276516,0.215915916102139,0,0.541892875087706,1.00337954770971,2.80363900349542,3.3243040357149,2.23874754722178,0,0,2.56450125116389,2.95213181129735,5.53143270929315,1.854738209659,2.1060976908219,3.38288949674411,0,1.30012049207304,0,0.096670718292122,0,0.15350367472613,0,0,0,0.255679882248303,0.712256285173899,2.64455864577565,4.99694175149276,9.44334072459923,8.49725359186619,0,0,0,0,0.532306030317022,0,1.11194531462352,1.43124886741991,0,0.316379424718726,0,0.255897791311334,0,0,1.56989728039846,0,0,0,2.42618977887979,3.17020642346017,0,0,10.4796800541452,2.11300293513511,0.136499911407986,0.282810863907425,0,0.551365343546124,0.66343897524122,1.31535265576129,1.15755106853338,0,1.62328301570163,0,0,0,0.196498082026242,0,0,1.05553817648832,0.658589785919804,0,0,2.98288549449087,3.35151137767894,9.80018863751903,0.941438007767792,2.15252686335615,3.36942951335251,1.7737206141467,1.37834040124176,0,0,0,0,0,0,0,0,2.45695363593188,0.962479855263359,4.6557641036396,0.185803175125719,2.59684583357601,0,3.66680427276291,0,0,0,0,0,0,0,0,0.169291777801603,0.481764225311099,0,0,0,3.07240764308458,2.01308497103174,1.66849141711908,0.586164286206121,0,0,0,0,1.4098700508785,8.04704323755345,0.146508179271894,5.09714191347956,0,12.7861266062886,0.23874448473769,0,0.614321404198464,6.95903353436409,0.984685914873589,5.23150913607658,0,1.26675244876796,3.18796781201712,0.276283915531148,0.755798243562828,0.613612095012929,0,0,6.65025798490219,6.26574111364632,0,2.170154924012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|phase1_expression=1.2717486548939,0.428201047781966,0.422863212287913,2.00146596706261,0.446961094427288,0,0,0,0.522371256399677,0.491467873003018,4.18680700783456,0.436882744260345,0.263766978228454,0,0.994192127183747,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0.309632246632152,7.35536979583142,10.2410012384605,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0.12786256184353,2.53007406669196,3.00802746381534,2.89693037921647,0.795285947051099,4.86634870302636,0.567208902984407,0.886917589850256,1.14185221401064,1.83370705696798,2.18577172975525,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0.39752481473341,0.860234595106124,1.04142150482278,2.26123176769604,1.67799774483962,2.20094433552054,0.626984899610432,0,0,0.33472061276467,0,1.52054421143703,0,0,2.43042584364528,0.267899184852239,0.22452937262617,0.450445921933289,0,0,0.549605231791222,0,0,2.61656431285521,0,0.886413581652058,1.05927344650575,0,0.709336764396714,0,0,0.74000264525148,0,0.404132016209064,0,0,0,0,0.312160076830321,0,1.34503812496621,0,0,0,0,0,0.309977343527296,0,0.741800787835671,0,2.15585442544872,0,0,0.277064115484183,0,0.612975591598039,0.751190294532984,0,0.538168907066586,0.213557388818567,0.635795703478686,1.50045548042201,0.206105058476878,1.03056216018252,0.37223371266318,1.0126579934476,0,0.504867548488229,0.276149695926898,0,0,0.302256294682921,0.339121184620975,1.54608682530637,1.63647672354501,2.58124135850103,0.365921118388786,0.132529768321485,1.51052125730374,1.34759371519982,0,0.36497735907583,1.56449532329816,0,0,0.464367928031979,0,6.50687400219141,6.91197229320217,6.50729780685401,7.72057809126758,7.40790109914181,7.1181185733329,6.47190279168789,5.88664395376038,5.77120735419586,0,1.40241773803446,0,0,0,0,0,0,1.72183813960359,0.343135620597051,4.49976170175365,8.99214026060957,2.01057944823262,0.462942225792648,0,0,1.44331342025273,0.463721619900307,0.587043471179108,0,0,0.190254152234598,3.1608175918371,5.15091697256924,0,0,0,0.93733833986777,1.84780341018745,0.567100388969546,4.74660170325096,3.48760726216754,14.9519244874432,0,0,0.207328115540772,0.288239906833923,0.6312121671319,0.063497894292169,4.20187268114105,0,1.71072446022705,0,6.30720421472227,0,0,0,0.07333828582095,0.646358578788889,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.532844358032199,0,0,0.823240336780769,0,0,0,0.602878754119172,1.74306691720059,0.199945982364114,0,0,0,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.716243852959582,0.896681151948218,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0.601892199455438,9.09630016223939,1.03473071292505,0.664225598535437,0,0,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,1.38115775959256,0.280660094433074,0.512556597022804,1.53512174720011,0.482561763430822,0,0.308419387605311,0,0.0821271560138091,0.519254429183621,0.116210378459959,2.1754700926492,3.80962293576241,6.16942625870505,0,0,0.131124414959424,2.70719767744447,1.69433741629712,1.56869953835371,0,1.37217117560738,0,0.170093705276516,0.215915916102139,0,0.541892875087706,1.00337954770971,2.80363900349542,3.3243040357149,2.23874754722178,0,0,2.56450125116389,2.95213181129735,5.53143270929315,1.854738209659,2.1060976908219,3.38288949674411,0,1.30012049207304,0,0.096670718292122,0,0.15350367472613,0,0,0,0.255679882248303,0.712256285173899,2.64455864577565,4.99694175149276,9.44334072459923,8.49725359186619,0,0,0,0,0.532306030317022,0,1.11194531462352,1.43124886741991,0,0.316379424718726,0,0.255897791311334,0,0,1.56989728039846,0,0,0,2.42618977887979,3.17020642346017,0,0,10.4796800541452,2.11300293513511,0.136499911407986,0.282810863907425,0,0.551365343546124,0.66343897524122,1.31535265576129,1.15755106853338,0,1.62328301570163,0,0,0,0.196498082026242,0,0,1.05553817648832,0.658589785919804,0,0,2.98288549449087,3.35151137767894,9.80018863751903,0.941438007767792,2.15252686335615,3.36942951335251,1.7737206141467,1.37834040124176,0,0,0,0,0,0,0,0,2.45695363593188,0.962479855263359,4.6557641036396,0.185803175125719,2.59684583357601,0,3.66680427276291,0,0,0,0,0,0,0,0,0.169291777801603,0.481764225311099,0,0,0,3.07240764308458,2.01308497103174,1.66849141711908,0.586164286206121,0,0,0,0,1.4098700508785,8.04704323755345,0.146508179271894,5.09714191347956,0,12.7861266062886,0.23874448473769,0,0.614321404198464,6.95903353436409,0.984685914873589,5.23150913607658,0,1.26675244876796,3.18796781201712,0.276283915531148,0.755798243562828,0.613612095012929,0,0,6.65025798490219,6.26574111364632,0,2.170154924012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| ||
|short_description=p1@CCNO | |short_description=p1@CCNO | ||
}} | }} |
Latest revision as of 04:00, 18 September 2015
Short description: | p1@CCNO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNO_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000501463, uc003jpv.2_5end |
EntrezGene: | CCNO |
HGNC: | 18576 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.56e-25 | 253 |
endo-epithelial cell | 2.45e-13 | 42 |
endodermal cell | 6.94e-11 | 58 |
respiratory epithelial cell | 3.75e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 1.22e-13 | 38 |
endoderm of foregut | 1.22e-13 | 38 |
respiratory system | 5.98e-13 | 74 |
respiratory tract | 1.65e-11 | 54 |
endoderm-derived structure | 8.06e-09 | 160 |
endoderm | 8.06e-09 | 160 |
presumptive endoderm | 8.06e-09 | 160 |
segment of respiratory tract | 1.33e-08 | 47 |
foregut | 1.93e-08 | 87 |
organ system subdivision | 3.52e-08 | 223 |
trunk region element | 4.54e-08 | 101 |
digestive system | 7.92e-08 | 145 |
digestive tract | 7.92e-08 | 145 |
primitive gut | 7.92e-08 | 145 |
epithelial bud | 8.14e-08 | 37 |
larynx | 1.10e-07 | 9 |
thoracic segment of trunk | 4.10e-07 | 52 |
subdivision of digestive tract | 5.04e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.20e-26 | 143 |
carcinoma | 3.21e-23 | 106 |
disease of cellular proliferation | 5.83e-17 | 239 |
cancer | 1.06e-16 | 235 |
adenocarcinoma | 5.06e-08 | 25 |
squamous cell carcinoma | 2.55e-07 | 14 |