FFCP PHASE1:Hg19::chr1:161015752..161015778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=7391 | |EntrezGene=7391 | ||
| Line 8: | Line 8: | ||
|UniProt=P22415,Q7Z5Y1,E9PJ52 | |UniProt=P22415,Q7Z5Y1,E9PJ52 | ||
|association_with_transcript=0bp_to_ENST00000368021,ENST00000435396,ENST00000473969,NM_007122,NM_207005,uc001fxi.2,uc001fxj.2_5end | |association_with_transcript=0bp_to_ENST00000368021,ENST00000435396,ENST00000473969,NM_007122,NM_207005,uc001fxi.2,uc001fxj.2_5end | ||
|cluster_id=chr1:161015752..161015778,- | |||
|description=CAGE_peak_2_at_USF1_5end | |description=CAGE_peak_2_at_USF1_5end | ||
|id=chr1:161015752..161015778,- | |id=chr1:161015752..161015778,- | ||
Latest revision as of 04:16, 18 September 2015
| Short description: | p2@USF1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_USF1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000368021, ENST00000435396, ENST00000473969, NM_007122, NM_207005, uc001fxi.2, uc001fxj.2_5end |
| EntrezGene: | USF1 |
| HGNC: | 12593 |
| UniProt: | P22415Q7Z5Y1E9PJ52 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@USF1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 3.56e-22 | 136 |
| nongranular leukocyte | 4.53e-19 | 115 |
| hematopoietic stem cell | 1.78e-18 | 168 |
| hematopoietic lineage restricted progenitor cell | 9.22e-18 | 120 |
| hematopoietic oligopotent progenitor cell | 1.29e-16 | 161 |
| hematopoietic multipotent progenitor cell | 1.29e-16 | 161 |
| hematopoietic cell | 2.68e-16 | 177 |
| myeloid leukocyte | 1.96e-10 | 72 |
| lymphocyte | 2.74e-10 | 53 |
| common lymphoid progenitor | 2.74e-10 | 53 |
Showing 1 to 10 of 23 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.79e-12 | 114 |
| hematopoietic system | 1.20e-09 | 98 |
| blood island | 1.20e-09 | 98 |
| hemolymphoid system | 6.70e-09 | 108 |
| neural tube | 1.11e-07 | 56 |
| neural rod | 1.11e-07 | 56 |
| future spinal cord | 1.11e-07 | 56 |
| neural keel | 1.11e-07 | 56 |
| regional part of nervous system | 1.32e-07 | 53 |
| regional part of brain | 1.32e-07 | 53 |
Showing 1 to 10 of 14 entries
