FFCP PHASE1:Hg19::chr13:95131432..95131447,-: Difference between revisions
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|id=chr13:95131432..95131447,-
|short_description=p4@DCT
|description=CAGE_peak_4_at_DCT_5end
|association_with_transcript=475bp_to_ENST00000472871_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1638 | |EntrezGene=1638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2709 | |HGNC=2709 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=475bp_to_ENST00000472871_5end | |||
|cluster_id=chr13:95131432..95131447,- | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_4_at_DCT_5end | |||
|id=chr13:95131432..95131447,- | |||
|ontology_enrichment_celltype=CL:0000148!9.80e-33!10;CL:0000541!9.80e-33!10;CL:0000147!2.15e-31!14;CL:0000133!1.95e-16!59;CL:0000710!3.43e-16!20;CL:0000333!4.53e-16!41;CL:0000221!1.89e-13!71;CL:0000075!6.98e-12!27;CL:0000325!7.90e-11!39;CL:0002566!1.43e-10!1;CL:0002077!1.22e-09!33;CL:0002319!2.50e-08!25;CL:0002322!2.73e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.61e-50;10!CL:0000147;1.31e-48;14!CL:0000710;3.97e-25;20!CL:0000075;1.42e-18;27!CL:0002566;2.38e-15;1!CL:0002077;5.75e-13;34!CL:0002322;2.74e-12;5!CL:0000047;2.48e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.93e-50,10;CL:0000541,1.93e-50,10;CL:0000147,1.26e-48,14;CL:0000710,3.42e-25,20;CL:0000333,2.06e-20,41;CL:0000075,1.27e-18,27;CL:0000133,6.29e-18,59;CL:0002566,1.78e-15,1;CL:0002077,9.53e-15,34;CL:0000221,1.24e-14,72;CL:0002322,2.99e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.65e-20;3!CL:0000133;3.52e-09;59 | |||
|ontology_enrichment_disease=DOID:1909!2.86e-19!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.20e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.20e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.90e-17!5;UBERON:0005388!2.90e-17!5;UBERON:0001802!2.90e-17!5;UBERON:0002240!1.13e-12!3;UBERON:0007029!3.01e-10!1;UBERON:0005743!9.59e-09!86;UBERON:0005174!5.81e-08!5;UBERON:0001137!5.81e-08!5;UBERON:0000073!8.55e-08!94;UBERON:0001016!8.55e-08!94;UBERON:0000970!1.37e-07!20;UBERON:0002104!3.11e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.04e-26;5!UBERON:0005388;3.04e-26;5!UBERON:0001802;3.04e-26;5!UBERON:0000970;1.16e-11;20!UBERON:0002104;4.05e-11;21!UBERON:0000020;3.55e-10;23!UBERON:0001032;9.21e-10;24!UBERON:0004456;9.21e-10;24!UBERON:0000019;2.37e-07;19!UBERON:0000047;2.37e-07;19!UBERON:0004088;2.37e-07;19!UBERON:0010230;2.37e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,6.70e-22,6;UBERON:0005388,6.70e-22,6;UBERON:0001802,6.70e-22,6;UBERON:0000970,4.27e-11,21;UBERON:0002104,4.27e-11,21;UBERON:0000020,9.64e-10,24;UBERON:0001032,9.64e-10,24;UBERON:0004456,9.64e-10,24;UBERON:0000019,5.56e-07,20;UBERON:0000047,5.56e-07,20;UBERON:0010312,5.56e-07,20;UBERON:0004088,5.56e-07,20;UBERON:0010230,5.56e-07,20;UBERON:0003072,5.56e-07,20;UBERON:0004128,5.56e-07,20;UBERON:0003071,5.56e-07,20 | |||
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|short_description=p4@DCT | |||
}} | }} |
Latest revision as of 05:19, 18 September 2015
Short description: | p4@DCT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DCT_5end |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | 475bp_to_ENST00000472871_5end |
EntrezGene: | DCT |
HGNC: | 2709 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.93e-50 | 10 |
melanoblast | 1.93e-50 | 10 |
pigment cell | 1.26e-48 | 14 |
neurecto-epithelial cell | 3.42e-25 | 20 |
migratory neural crest cell | 2.06e-20 | 41 |
columnar/cuboidal epithelial cell | 1.27e-18 | 27 |
neurectodermal cell | 6.29e-18 | 59 |
dark melanocyte | 1.78e-15 | 1 |
ecto-epithelial cell | 9.53e-15 | 34 |
ectodermal cell | 1.24e-14 | 72 |
embryonic stem cell | 2.99e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
retina | 6.70e-22 | 6 |
photoreceptor array | 6.70e-22 | 6 |
posterior segment of eyeball | 6.70e-22 | 6 |
eye | 4.27e-11 | 21 |
visual system | 4.27e-11 | 21 |
sense organ | 9.64e-10 | 24 |
sensory system | 9.64e-10 | 24 |
entire sense organ system | 9.64e-10 | 24 |
camera-type eye | 5.56e-07 | 20 |
simple eye | 5.56e-07 | 20 |
immature eye | 5.56e-07 | 20 |
ocular region | 5.56e-07 | 20 |
eyeball of camera-type eye | 5.56e-07 | 20 |
optic cup | 5.56e-07 | 20 |
optic vesicle | 5.56e-07 | 20 |
eye primordium | 5.56e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.20e-08 | 2 |