FFCP PHASE1:Hg19::chr1:161207986..161207998,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9970 | |EntrezGene=9970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7969 | |HGNC=7969 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCF2 | |UniProt=E9PCF2 | ||
|association_with_transcript=0bp_to_ENST00000506209_5end | |association_with_transcript=0bp_to_ENST00000506209_5end | ||
|cluster_id=chr1:161207986..161207998,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_NR1I3_5end | |description=CAGE_peak_2_at_NR1I3_5end | ||
|id=chr1:161207986..161207998,- | |id=chr1:161207986..161207998,- | ||
|ontology_enrichment_celltype=CL:0000181!3.84e-10!12;CL:0000417!3.84e-10!12;CL:0000668!3.84e-10!12;CL:0000414!3.84e-10!12;CL:0000412!3.84e-10!12;CL:0000182!3.84e-10!12 | |ontology_enrichment_celltype=CL:0000181!3.84e-10!12;CL:0000417!3.84e-10!12;CL:0000668!3.84e-10!12;CL:0000414!3.84e-10!12;CL:0000412!3.84e-10!12;CL:0000182!3.84e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.91e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.00e-09;11!UBERON:0009497;8.89e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.10e-16!19;UBERON:0006925!1.10e-16!19;UBERON:0008836!1.10e-16!19;UBERON:0008835!2.08e-14!22;UBERON:0003894!2.08e-14!22;UBERON:0009854!8.82e-14!23;UBERON:0005172!1.03e-13!55;UBERON:0005173!1.03e-13!55;UBERON:0007499!1.12e-12!25;UBERON:0009497!1.12e-12!25;UBERON:0000015!1.12e-12!25;UBERON:0002423!1.12e-12!25;UBERON:0006235!1.12e-12!25;UBERON:0004161!1.12e-12!25;UBERON:0002417!2.76e-12!61;UBERON:0000916!2.76e-12!61;UBERON:0005057!3.47e-12!26;UBERON:0009856!3.47e-12!26;UBERON:0002365!3.29e-10!31;UBERON:0002330!3.29e-10!31;UBERON:0002368!4.94e-09!35;UBERON:0000949!5.34e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.41e-29;19!UBERON:0006925;3.41e-29;19!UBERON:0002423;2.85e-22;25!UBERON:0002365;5.66e-18;31!UBERON:0002330;5.66e-18;31!UBERON:0002368;1.50e-15;33!UBERON:0000949;2.53e-11;43!UBERON:0005172;3.22e-08;52!UBERON:0005173;3.22e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.21e-29,19;UBERON:0006925,3.21e-29,19;UBERON:0008836,3.21e-29,19;UBERON:0008835,2.76e-25,22;UBERON:0003894,2.76e-25,22;UBERON:0009854,3.35e-24,23;UBERON:0007499,2.72e-22,25;UBERON:0009497,2.72e-22,25;UBERON:0000015,2.72e-22,25;UBERON:0002423,2.72e-22,25;UBERON:0006235,2.72e-22,25;UBERON:0004161,2.72e-22,25;UBERON:0009856,1.91e-21,26;UBERON:0002365,4.92e-18,31;UBERON:0002330,4.92e-18,31;UBERON:0002368,5.28e-16,35;UBERON:0000949,1.70e-12,45;UBERON:0003929,1.92e-10,54;UBERON:0005172,1.92e-10,54;UBERON:0005173,1.92e-10,54;UBERON:0002530,1.43e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0005911,6.51e-07,82 | |||
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|short_description=p2@NR1I3 | |short_description=p2@NR1I3 | ||
}} | }} |
Latest revision as of 05:41, 18 September 2015
Short description: | p2@NR1I3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NR1I3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000506209_5end |
EntrezGene: | NR1I3 |
HGNC: | 7969 |
UniProt: | E9PCF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.21e-29 | 19 |
digestive gland | 3.21e-29 | 19 |
liver bud | 3.21e-29 | 19 |
hepatic diverticulum | 2.76e-25 | 22 |
liver primordium | 2.76e-25 | 22 |
digestive tract diverticulum | 3.35e-24 | 23 |
epithelial sac | 2.72e-22 | 25 |
epithelium of foregut-midgut junction | 2.72e-22 | 25 |
anatomical boundary | 2.72e-22 | 25 |
hepatobiliary system | 2.72e-22 | 25 |
foregut-midgut junction | 2.72e-22 | 25 |
septum transversum | 2.72e-22 | 25 |
sac | 1.91e-21 | 26 |
exocrine gland | 4.92e-18 | 31 |
exocrine system | 4.92e-18 | 31 |
endocrine gland | 5.28e-16 | 35 |
endocrine system | 1.70e-12 | 45 |
gut epithelium | 1.92e-10 | 54 |
abdomen element | 1.92e-10 | 54 |
abdominal segment element | 1.92e-10 | 54 |
gland | 1.43e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
endo-epithelium | 6.51e-07 | 82 |