FFCP PHASE1:Hg19::chr6:33244918..33244954,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8705 | |EntrezGene=8705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=919 | |HGNC=919 | ||
|TSSclassifier=strong | |||
|UniProt=O96024,B3KQP5,Q5STJ7 | |UniProt=O96024,B3KQP5,Q5STJ7 | ||
|association_with_transcript=1bp_to_ENST00000451237,NM_003782,uc003odr.2_5end | |association_with_transcript=1bp_to_ENST00000451237,NM_003782,uc003odr.2_5end | ||
|cluster_id=chr6:33244918..33244954,+ | |||
|description=CAGE_peak_1_at_B3GALT4_5end | |description=CAGE_peak_1_at_B3GALT4_5end | ||
|id=chr6:33244918..33244954,+ | |id=chr6:33244918..33244954,+ | ||
|ontology_enrichment_celltype=CL:0000791;2.34e-08;18!CL:0000789;2.34e-08;18!CL:0002419;2.34e-08;18!CL:0000625;5.10e-07;11 | |ontology_enrichment_celltype=CL:0000738!4.13e-16!140;CL:0002031!1.97e-12!124;CL:0002087!8.49e-12!119;CL:0000766!3.07e-09!76;CL:0000791!3.97e-08!18;CL:0000789!3.97e-08!18;CL:0002420!3.97e-08!18;CL:0002419!3.97e-08!18;CL:0000790!3.97e-08!18;CL:0000557!1.17e-07!71;CL:0000037!1.99e-07!172;CL:0000566!1.99e-07!172;CL:0002032!3.90e-07!165;CL:0000837!3.90e-07!165;CL:0000839!4.73e-07!70;CL:0000988!4.98e-07!182;CL:0000625!8.79e-07!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;2.34e-08;18!CL:0000789;2.34e-08;18!CL:0002419;2.34e-08;18!CL:0000625;5.10e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.96e-18,136;CL:0002031,4.37e-14,120;CL:0002087,1.29e-13,115;CL:0000766,6.34e-11,72;CL:0000557,3.81e-09,67;CL:0000037,4.44e-09,168;CL:0002032,6.92e-09,161;CL:0000837,6.92e-09,161;CL:0000988,1.19e-08,177;CL:0000791,1.87e-08,18;CL:0000789,1.87e-08,18;CL:0002420,1.87e-08,18;CL:0002419,1.87e-08,18;CL:0000790,1.87e-08,18;CL:0000839,2.80e-08,66;CL:0002009,5.30e-08,61;CL:0002194,9.94e-08,59;CL:0000576,9.94e-08,59;CL:0000040,9.94e-08,59;CL:0000559,9.94e-08,59;CL:0000473,3.74e-07,48;CL:0000234,3.74e-07,48;CL:0000625,4.82e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.34e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.87e-21!115;UBERON:0002193!4.16e-10!112;UBERON:0002390!7.59e-10!102;UBERON:0003061!7.59e-10!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.98e-22,114;UBERON:0002390,1.28e-10,98;UBERON:0003061,1.28e-10,98;UBERON:0002193,2.02e-10,108;UBERON:0002405,1.89e-07,93 | |||
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| ||
|short_description=p1@B3GALT4 | |short_description=p1@B3GALT4 | ||
}} | }} |
Latest revision as of 06:25, 18 September 2015
Short description: | p1@B3GALT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B3GALT4_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000451237, NM_003782, uc003odr.2_5end |
EntrezGene: | B3GALT4 |
HGNC: | 919 |
UniProt: | O96024B3KQP5Q5STJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.96e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 4.37e-14 | 120 |
nongranular leukocyte | 1.29e-13 | 115 |
myeloid leukocyte | 6.34e-11 | 72 |
granulocyte monocyte progenitor cell | 3.81e-09 | 67 |
hematopoietic stem cell | 4.44e-09 | 168 |
hematopoietic oligopotent progenitor cell | 6.92e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.92e-09 | 161 |
hematopoietic cell | 1.19e-08 | 177 |
mature alpha-beta T cell | 1.87e-08 | 18 |
alpha-beta T cell | 1.87e-08 | 18 |
immature T cell | 1.87e-08 | 18 |
mature T cell | 1.87e-08 | 18 |
immature alpha-beta T cell | 1.87e-08 | 18 |
myeloid lineage restricted progenitor cell | 2.80e-08 | 66 |
macrophage dendritic cell progenitor | 5.30e-08 | 61 |
monopoietic cell | 9.94e-08 | 59 |
monocyte | 9.94e-08 | 59 |
monoblast | 9.94e-08 | 59 |
promonocyte | 9.94e-08 | 59 |
defensive cell | 3.74e-07 | 48 |
phagocyte | 3.74e-07 | 48 |
CD8-positive, alpha-beta T cell | 4.82e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.98e-22 | 114 |
hematopoietic system | 1.28e-10 | 98 |
blood island | 1.28e-10 | 98 |
hemolymphoid system | 2.02e-10 | 108 |
immune system | 1.89e-07 | 93 |