FFCP PHASE1:Hg19::chr8:41435998..41436060,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:41435998..41436060,+ to FFCP PHASE1:Hg19::chr8:41435998..41436060,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=137964 | |EntrezGene=137964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20880 | |HGNC=20880 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGW3 | |UniProt=E5RGW3 | ||
|association_with_transcript=64bp_to_ENST00000520223_5end | |||
|cluster_id=chr8:41435998..41436060,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_AGPAT6_5end | |||
|id=chr8:41435998..41436060,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.65e-09!42;CL:0000860!5.19e-08!45;CL:0000766!1.16e-07!76;CL:0000055!3.47e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.47e-10;8!CL:0000081;3.88e-09;11!CL:0002393;8.54e-08;6!CL:0002397;8.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.61e-10,8;CL:0000766,9.79e-10,72;CL:0000081,3.14e-09,11;CL:0000763,8.64e-07,108;CL:0000049,8.64e-07,108;CL:0000860,8.65e-07,42;CL:0002057,8.65e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.43e-10!167;UBERON:0004765!1.07e-07!101;UBERON:0001434!1.07e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.27e-08;20!UBERON:0002619;2.24e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.08e-09,20;UBERON:0004765,2.24e-08,90;UBERON:0001434,5.62e-08,100;UBERON:0002619,5.90e-08,22;UBERON:0002204,7.06e-08,167;UBERON:0002371,2.05e-07,76 | |||
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| ||
|short_description=p4@AGPAT6 | |||
}} | }} |
Latest revision as of 06:34, 18 September 2015
Short description: | p4@AGPAT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AGPAT6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 64bp_to_ENST00000520223_5end |
EntrezGene: | AGPAT6 |
HGNC: | 20880 |
UniProt: | E5RGW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.61e-10 | 8 |
myeloid leukocyte | 9.79e-10 | 72 |
blood cell | 3.14e-09 | 11 |
myeloid cell | 8.64e-07 | 108 |
common myeloid progenitor | 8.64e-07 | 108 |
classical monocyte | 8.65e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.65e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
neocortex | 5.08e-09 | 20 |
skeletal element | 2.24e-08 | 90 |
skeletal system | 5.62e-08 | 100 |
regional part of cerebral cortex | 5.90e-08 | 22 |
musculoskeletal system | 7.06e-08 | 167 |
bone marrow | 2.05e-07 | 76 |