FFCP PHASE1:Hg19::chr1:161736032..161736035,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:161736032..161736035,+
|short_description=p6@ATF6
|description=CAGE_peak_6_at_ATF6_5end
|association_with_transcript=0bp_to_NM_007348_5end
|EntrezGene=229...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22926 | |EntrezGene=22926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=791 | |HGNC=791 | ||
|TSSclassifier=strong | |||
|UniProt=A8K383,P18850 | |UniProt=A8K383,P18850 | ||
|association_with_transcript=0bp_to_NM_007348_5end | |||
|cluster_id=chr1:161736032..161736035,+ | |||
|description=CAGE_peak_6_at_ATF6_5end | |||
|id=chr1:161736032..161736035,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.11e-12!140;CL:0002032!2.29e-11!165;CL:0000837!2.29e-11!165;CL:0000988!5.19e-11!182;CL:0002031!9.62e-11!124;CL:0000037!1.34e-10!172;CL:0000566!1.34e-10!172;CL:0002087!6.95e-10!119;CL:0000860!1.60e-09!45;CL:0002057!1.84e-08!42;CL:0000542!8.75e-07!53;CL:0000051!8.75e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.60e-20;33!CL:0002057;3.60e-20;33!CL:0000473;5.15e-13;39!CL:0000234;5.15e-13;39!CL:0000771;2.20e-10;2!CL:0000453;1.42e-08;5!CL:0000576;1.07e-07;48!CL:0002087;7.20e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.32e-16,42;CL:0002057,6.32e-16,42;CL:0000473,1.41e-13,48;CL:0000234,1.41e-13,48;CL:0000738,1.93e-13,136;CL:0002009,1.45e-11,61;CL:0000766,5.90e-11,72;CL:0002032,1.59e-10,161;CL:0000837,1.59e-10,161;CL:0000771,2.12e-10,2;CL:0002031,2.19e-10,120;CL:0002194,2.67e-10,59;CL:0000576,2.67e-10,59;CL:0000040,2.67e-10,59;CL:0000559,2.67e-10,59;CL:0000557,2.82e-10,67;CL:0000988,3.88e-10,177;CL:0000037,7.24e-10,168;CL:0002087,8.96e-10,115;CL:0000763,1.78e-09,108;CL:0000049,1.78e-09,108;CL:0000839,6.16e-09,66;CL:0000453,2.57e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.45e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.07e-09,82;UBERON:0002371,1.00e-08,76;UBERON:0004765,4.92e-08,90;UBERON:0002405,1.13e-07,93;UBERON:0002193,3.22e-07,108;UBERON:0002390,3.28e-07,98;UBERON:0003061,3.28e-07,98;UBERON:0001434,6.26e-07,100 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.534893840235659,0.410502947249729,0.550975469195755,0,0.383829398097213,0.309632246632152,0,0,0,0.387336002901508,0.426507697462265,0,0,0,0,0,0,0,0.726991193897824,0,0,0.464858073811369,0,1.23882548358041,0.863077176966451,0.512321413058201,3.31075121844019,1.72372840368309,1.93645405075148,4.06279459783025,0.752969358170419,0,0.674170453335254,2.44867113896722,1.28371610830437,1.27867425159808,0.329851300186716,0.598390972864896,0,0.580418477257168,1.70215567407342,1.24564449799115,0.251248665256743,0.521482918420201,1.73751075764093,1.81619850790011,2.20966581592539,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,1.09227722252426,0,0.426730222566507,0.800791974072025,0,0.661044872784862,0,1.1384259382189,1.17447437874188,0.764546456250458,0,0,0,0,0.393010762749165,0,0.167186495390678,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0.664601683750863,0.270803863765016,0.640456598628376,0.520237390239513,0.328875809207352,0,0.289803085735052,0.296573126324121,0.802622484269139,2.09071047609954,0.339928028092699,0,0.68725489096526,0,0.318565414324097,0,0,0.301150238155546,0.639933055772092,0,0,0.821127996921047,0.604820229674197,0.534880391567015,0,0,0,0.12786256184353,0,0,0,0,0.973269740605272,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0.0892997282840798,0.44905874525234,0.450445921933289,0,0,0,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.473227200159376,0.505754070234305,1.20505514941741,0.661763836394364,0.217879444092406,1.18635309555548,0.674156540800822,0.98110732562673,1.15424147083917,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.234817388471643,1.01056513432752,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0.985326475791887,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.591092280605782,0.431255149719035,0.128343036279748,0,0,0.773288812777695,0,0.637938751653163,0.749007023947182,0,0.414415513436035,0.12269149171914,0,0,0,0.356857977594324,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0,0.0821271560138091,0,0,0.604297247958111,0,0.460404944679482,0,0,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0,0.784306353074702,0.256450125116389,0,0,0.515205058238611,0.27470839445503,0.495056999523528,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0,0,0.267096106940212,0,0,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.753150406214233,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.822724546172388,0,0.540031437238115,0,0.213648142254946,0.962479855263359,0.245040215981032,0.185803175125719,0.28853842595289,0.782560276832555,1.4348364545594,0.59873811429845,0.383010740264733,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0.485442086998054,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,0.369254416383208,0.622079175323615,0.629078458031288,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0.349839999984783,0,0.1137934482855,0.254253650292766,0,0,0,0.173624994933292,0.885741385813839,0,0,0,0,0,0.980446171670911,0.557694977114413,0,0,0.69169171316418,0.538545866458633,0.325942115766024,0,0.183195186803725,0.533034776018635,0,0,0,0.451191321234361,0,0.335643173951685,0.569261198172555,0,0.210998064528027,0.979396848954886,0.282706142867882,0,0,0.176915129006678,0,1.77912677208373,0.741383633679017,0.626531697032732,0.067401132980677,0,0,0.91227394607833,0.391329237864179,0.242780379534093,0,0,0,0.252746318513952,0.150323419414493,0.72581733978073,0,0.330991955875499,0.313932918407225,0,1.13843818411917,0.138674673013139,0.173559738335131,0.0979923974143777,0.435296032902013,0,0.171986032471617,0.677294319023596,0.438535902517113,0.328461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| ||
|short_description=p6@ATF6 | |||
}} | }} |
Latest revision as of 06:40, 18 September 2015
Short description: | p6@ATF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ATF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_007348_5end |
EntrezGene: | ATF6 |
HGNC: | 791 |
UniProt: | A8K383P18850 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.32e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.32e-16 | 42 |
defensive cell | 1.41e-13 | 48 |
phagocyte | 1.41e-13 | 48 |
leukocyte | 1.93e-13 | 136 |
macrophage dendritic cell progenitor | 1.45e-11 | 61 |
myeloid leukocyte | 5.90e-11 | 72 |
hematopoietic oligopotent progenitor cell | 1.59e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-10 | 161 |
eosinophil | 2.12e-10 | 2 |
hematopoietic lineage restricted progenitor cell | 2.19e-10 | 120 |
monopoietic cell | 2.67e-10 | 59 |
monocyte | 2.67e-10 | 59 |
monoblast | 2.67e-10 | 59 |
promonocyte | 2.67e-10 | 59 |
granulocyte monocyte progenitor cell | 2.82e-10 | 67 |
hematopoietic cell | 3.88e-10 | 177 |
hematopoietic stem cell | 7.24e-10 | 168 |
nongranular leukocyte | 8.96e-10 | 115 |
myeloid cell | 1.78e-09 | 108 |
common myeloid progenitor | 1.78e-09 | 108 |
myeloid lineage restricted progenitor cell | 6.16e-09 | 66 |
Langerhans cell | 2.57e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
bone element | 4.07e-09 | 82 |
bone marrow | 1.00e-08 | 76 |
skeletal element | 4.92e-08 | 90 |
immune system | 1.13e-07 | 93 |
hemolymphoid system | 3.22e-07 | 108 |
hematopoietic system | 3.28e-07 | 98 |
blood island | 3.28e-07 | 98 |
skeletal system | 6.26e-07 | 100 |