FFCP PHASE1:Hg19::chr1:45241186..45241289,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6202 | |EntrezGene=6202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10441 | |HGNC=10441 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JR95,P62241,Q5JR94 | |UniProt=Q5JR95,P62241,Q5JR94 | ||
|association_with_transcript=0bp_to_ENST00000372209,ENST00000470475,NM_001012,uc001cmi.2_5end | |association_with_transcript=0bp_to_ENST00000372209,ENST00000470475,NM_001012,uc001cmi.2_5end | ||
|cluster_id=chr1:45241186..45241289,+ | |||
|coexpression_cluster_id=C1236 | |||
|description=CAGE_peak_1_at_RPS8_5end | |description=CAGE_peak_1_at_RPS8_5end | ||
|id=chr1:45241186..45241289,+ | |id=chr1:45241186..45241289,+ | ||
|ontology_enrichment_celltype=CL:0000012!1.30e-43!682;CL:0000548!1.37e-42!679;CL:0000004!1.37e-42!679;CL:0000255!1.37e-42!679;CL:0000003!1.74e-29!722;CL:0000144!5.21e-27!625;CL:0002321!2.88e-23!248;CL:0000220!1.75e-22!246;CL:0000066!7.07e-22!254;CL:0002371!1.33e-18!591;CL:0000063!1.12e-14!578;CL:0000222!2.22e-14!119;CL:0000055!1.88e-12!180;CL:0000393!1.28e-10!60;CL:0000211!1.28e-10!60;CL:0000680!8.54e-10!57;CL:0000056!8.54e-10!57;CL:0000355!8.54e-10!57;CL:0000183!1.08e-09!59;CL:0000187!2.21e-09!54;CL:0000076!4.98e-09!62 | |ontology_enrichment_celltype=CL:0000012!1.30e-43!682;CL:0000548!1.37e-42!679;CL:0000004!1.37e-42!679;CL:0000255!1.37e-42!679;CL:0000003!1.74e-29!722;CL:0000144!5.21e-27!625;CL:0002321!2.88e-23!248;CL:0000220!1.75e-22!246;CL:0000066!7.07e-22!254;CL:0002371!1.33e-18!591;CL:0000063!1.12e-14!578;CL:0000222!2.22e-14!119;CL:0000055!1.88e-12!180;CL:0000393!1.28e-10!60;CL:0000211!1.28e-10!60;CL:0000680!8.54e-10!57;CL:0000056!8.54e-10!57;CL:0000355!8.54e-10!57;CL:0000183!1.08e-09!59;CL:0000187!2.21e-09!54;CL:0000076!4.98e-09!62 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.14e-23,250;CL:0000066,6.55e-22,253;CL:0000222,1.03e-14,121;CL:0000393,1.68e-10,61;CL:0000211,1.68e-10,61;CL:0000680,1.11e-09,58;CL:0000056,1.11e-09,58;CL:0000355,1.11e-09,58;CL:0000187,2.87e-09,55;CL:0000076,3.53e-09,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.55e-19!239;DOID:162!1.67e-18!235;DOID:2531!3.58e-12!51;DOID:0060083!3.58e-12!51;DOID:0050686!3.81e-11!137;DOID:1240!3.63e-10!39;DOID:8692!1.24e-09!31;DOID:305!1.18e-07!106;DOID:0050687!2.08e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.68e-09;31!DOID:1240;2.78e-08;39!DOID:2531;2.26e-07;51!DOID:0060083;2.26e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.55e-19,239;DOID:162,1.67e-18,235;DOID:2531,3.58e-12,51;DOID:0060083,3.58e-12,51;DOID:0050686,3.81e-11,137;DOID:1240,3.63e-10,39;DOID:8692,1.24e-09,31;DOID:305,1.18e-07,106;DOID:0050687,2.08e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000486!3.92e-10!82;UBERON:0004290!1.14e-09!70;UBERON:0003104!2.83e-09!238;UBERON:0009142!2.83e-09!238;UBERON:0000914!2.86e-09!83;UBERON:0002329!2.86e-09!83;UBERON:0003077!2.86e-09!83;UBERON:0003059!2.86e-09!83;UBERON:0007282!2.86e-09!83;UBERON:0009618!2.86e-09!83;UBERON:0007285!2.86e-09!83;UBERON:0000490!7.80e-09!138;UBERON:0005256!6.55e-08!143;UBERON:0001134!1.03e-07!61;UBERON:0002036!1.03e-07!61;UBERON:0003082!1.03e-07!61;UBERON:0002100!1.29e-07!216;UBERON:0002049!2.07e-07!79;UBERON:0007798!2.07e-07!79;UBERON:0000487!3.30e-07!22;UBERON:0001981!9.51e-07!60;UBERON:0007500!9.51e-07!60;UBERON:0004537!9.51e-07!60;UBERON:0006965!9.51e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;3.44e-07;22!UBERON:0000072;6.09e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.17e-11,78;UBERON:0000490,1.51e-10,148;UBERON:0000486,4.67e-10,83;UBERON:0002329,1.40e-09,71;UBERON:0003059,1.40e-09,71;UBERON:0007282,1.40e-09,71;UBERON:0004290,1.40e-09,71;UBERON:0009618,1.40e-09,71;UBERON:0003077,5.80e-09,72;UBERON:0007285,5.80e-09,72;UBERON:0007524,9.16e-09,73;UBERON:0002100,3.50e-08,199;UBERON:0002049,9.76e-08,78;UBERON:0007798,9.76e-08,78;UBERON:0001134,1.23e-07,62;UBERON:0002036,1.23e-07,62;UBERON:0003082,1.23e-07,62;UBERON:0000487,3.30e-07,22;UBERON:0007500,4.16e-07,59;UBERON:0001981,4.16e-07,59;UBERON:0004537,4.16e-07,59;UBERON:0006965,4.16e-07,59;UBERON:0000055,6.26e-07,68 | |||
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|short_description=p1@RPS8 | |short_description=p1@RPS8 | ||
}} | }} |
Latest revision as of 06:45, 18 September 2015
Short description: | p1@RPS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS8_5end |
Coexpression cluster: | C1236_acute_Mesenchymal_iPS_Skeletal_Bronchial_chronic_embryonic |
Association with transcript: | 0bp_to_ENST00000372209, ENST00000470475, NM_001012, uc001cmi.2_5end |
EntrezGene: | RPS8 |
HGNC: | 10441 |
UniProt: | Q5JR95P62241Q5JR94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.14e-23 | 250 |
epithelial cell | 6.55e-22 | 253 |
mesodermal cell | 1.03e-14 | 121 |
electrically responsive cell | 1.68e-10 | 61 |
electrically active cell | 1.68e-10 | 61 |
muscle precursor cell | 1.11e-09 | 58 |
myoblast | 1.11e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-09 | 58 |
muscle cell | 2.87e-09 | 55 |
squamous epithelial cell | 3.53e-09 | 63 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 4.17e-11 | 78 |
unilaminar epithelium | 1.51e-10 | 148 |
multilaminar epithelium | 4.67e-10 | 83 |
somite | 1.40e-09 | 71 |
presomitic mesoderm | 1.40e-09 | 71 |
presumptive segmental plate | 1.40e-09 | 71 |
dermomyotome | 1.40e-09 | 71 |
trunk paraxial mesoderm | 1.40e-09 | 71 |
paraxial mesoderm | 5.80e-09 | 72 |
presumptive paraxial mesoderm | 5.80e-09 | 72 |
dense mesenchyme tissue | 9.16e-09 | 73 |
trunk | 3.50e-08 | 199 |
vasculature | 9.76e-08 | 78 |
vascular system | 9.76e-08 | 78 |
skeletal muscle tissue | 1.23e-07 | 62 |
striated muscle tissue | 1.23e-07 | 62 |
myotome | 1.23e-07 | 62 |
simple squamous epithelium | 3.30e-07 | 22 |
epithelial tube open at both ends | 4.16e-07 | 59 |
blood vessel | 4.16e-07 | 59 |
blood vasculature | 4.16e-07 | 59 |
vascular cord | 4.16e-07 | 59 |
vessel | 6.26e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.55e-19 | 239 |
cancer | 1.67e-18 | 235 |
hematologic cancer | 3.58e-12 | 51 |
immune system cancer | 3.58e-12 | 51 |
organ system cancer | 3.81e-11 | 137 |
leukemia | 3.63e-10 | 39 |
myeloid leukemia | 1.24e-09 | 31 |
carcinoma | 1.18e-07 | 106 |
cell type cancer | 2.08e-07 | 143 |