FFCP PHASE1:Hg19::chr10:47151341..47151358,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=643650 | |EntrezGene=643650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_NR_033957,uc001jef.2_5end | |association_with_transcript=41bp_to_NR_033957,uc001jef.2_5end | ||
|cluster_id=chr10:47151341..47151358,- | |||
|description=CAGE_peak_1_at_LOC643650_5end | |description=CAGE_peak_1_at_LOC643650_5end | ||
|id=chr10:47151341..47151358,- | |id=chr10:47151341..47151358,- |
Latest revision as of 07:56, 18 September 2015
Short description: | p1@LOC643650 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC643650_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_NR_033957, uc001jef.2_5end |
EntrezGene: | LOC643650 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@LOC643650 |
---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 8.19e-12 | 19 |
extraembryonic cell | 1.25e-09 | 19 |
adipocyte of omentum tissue | 9.78e-09 | 3 |
preadipocyte of the breast | 3.83e-08 | 3 |
preadipocyte | 3.26e-07 | 12 |
fibroblast | 5.40e-07 | 76 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
omentum | 4.42e-11 | 6 |
peritoneum | 4.42e-11 | 6 |
abdominal cavity | 4.42e-11 | 6 |
visceral peritoneum | 4.42e-11 | 6 |
amnion | 1.06e-09 | 7 |
extraembryonic membrane | 1.46e-08 | 14 |
membranous layer | 1.46e-08 | 14 |
somatic layer of lateral plate mesoderm | 1.99e-08 | 8 |
organ component layer | 2.50e-08 | 66 |
extraembryonic structure | 3.05e-07 | 24 |
Showing 1 to 10 of 10 entries