FFCP PHASE1:Hg19::chr19:42721785..42721796,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=162989 | |EntrezGene=162989 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24450 | |HGNC=24450 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WXF8 | |UniProt=Q8WXF8 | ||
|association_with_transcript=16bp_to_ENST00000336034,NM_133328,uc002osu.1,uc002osv.1,uc002osw.1,uc002osx.1_5end | |association_with_transcript=16bp_to_ENST00000336034,NM_133328,uc002osu.1,uc002osv.1,uc002osw.1,uc002osx.1_5end | ||
|cluster_id=chr19:42721785..42721796,- | |||
|coexpression_cluster_id=C3798 | |coexpression_cluster_id=C3798 | ||
|description=CAGE_peak_5_at_DEDD2_5end | |description=CAGE_peak_5_at_DEDD2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!2.36e-26!42;CL:0000860!3.19e-25!45;CL:0000839!9.87e-24!70;CL:0000766!1.36e-23!76;CL:0000557!1.16e-20!71;CL:0002194!3.28e-20!63;CL:0000576!3.28e-20!63;CL:0000040!3.28e-20!63;CL:0000559!3.28e-20!63;CL:0002009!3.33e-19!65;CL:0000763!3.07e-16!112;CL:0000049!3.07e-16!112;CL:0000738!1.98e-14!140;CL:0002031!7.37e-14!124;CL:0000037!1.37e-11!172;CL:0000566!1.37e-11!172;CL:0002087!1.43e-11!119;CL:0002032!1.96e-11!165;CL:0000837!1.96e-11!165;CL:0000988!1.13e-10!182 | |ontology_enrichment_celltype=CL:0002057!2.36e-26!42;CL:0000860!3.19e-25!45;CL:0000839!9.87e-24!70;CL:0000766!1.36e-23!76;CL:0000557!1.16e-20!71;CL:0002194!3.28e-20!63;CL:0000576!3.28e-20!63;CL:0000040!3.28e-20!63;CL:0000559!3.28e-20!63;CL:0002009!3.33e-19!65;CL:0000763!3.07e-16!112;CL:0000049!3.07e-16!112;CL:0000738!1.98e-14!140;CL:0002031!7.37e-14!124;CL:0000037!1.37e-11!172;CL:0000566!1.37e-11!172;CL:0002087!1.43e-11!119;CL:0002032!1.96e-11!165;CL:0000837!1.96e-11!165;CL:0000988!1.13e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-09;33!CL:0002057;1.53e-09;33!CL:0000097;4.06e-09;5!CL:0000473;7.17e-09;39!CL:0000234;7.17e-09;39!CL:0000766;3.51e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.53e-09;33!CL:0002057;1.53e-09;33!CL:0000097;4.06e-09;5!CL:0000473;7.17e-09;39!CL:0000234;7.17e-09;39!CL:0000766;3.51e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.84e-10,72;CL:0000097,4.15e-09,5;CL:0002028,4.15e-09,5;CL:0000839,1.25e-08,66;CL:0000557,1.73e-08,67;CL:0000860,3.69e-08,42;CL:0002057,3.69e-08,42;CL:0000473,4.39e-07,48;CL:0000234,4.39e-07,48 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.72e-18!80;UBERON:0002390!6.52e-17!102;UBERON:0003061!6.52e-17!102;UBERON:0002193!6.90e-16!112;UBERON:0001474!1.02e-15!86;UBERON:0002405!4.32e-14!115;UBERON:0004765!1.72e-11!101;UBERON:0001434!1.72e-11!101;UBERON:0007023!2.38e-09!115 | |ontology_enrichment_uberon=UBERON:0002371!6.72e-18!80;UBERON:0002390!6.52e-17!102;UBERON:0003061!6.52e-17!102;UBERON:0002193!6.90e-16!112;UBERON:0001474!1.02e-15!86;UBERON:0002405!4.32e-14!115;UBERON:0004765!1.72e-11!101;UBERON:0001434!1.72e-11!101;UBERON:0007023!2.38e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;8.62e-12;1!UBERON:0004177;6.70e-09;5!UBERON:0005057;6.70e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0000996;8.62e-12;1!UBERON:0004177;6.70e-09;5!UBERON:0005057;6.70e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,8.62e-12,1;UBERON:0002405,3.13e-09,93;UBERON:0002390,1.08e-08,98;UBERON:0003061,1.08e-08,98;UBERON:0002193,9.22e-08,108;UBERON:0002371,2.21e-07,76;UBERON:0001474,8.88e-07,82 | |||
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| ||
|short_description=p5@DEDD2 | |short_description=p5@DEDD2 | ||
}} | }} |
Latest revision as of 08:07, 18 September 2015
Short description: | p5@DEDD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DEDD2_5end |
Coexpression cluster: | C3798_vagina_Mast_liver_breast_CD14_thymus_heart |
Association with transcript: | 16bp_to_ENST00000336034, NM_133328, uc002osu.1, uc002osv.1, uc002osw.1, uc002osx.1_5end |
EntrezGene: | DEDD2 |
HGNC: | 24450 |
UniProt: | Q8WXF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.84e-10 | 72 |
mast cell | 4.15e-09 | 5 |
basophil mast progenitor cell | 4.15e-09 | 5 |
myeloid lineage restricted progenitor cell | 1.25e-08 | 66 |
granulocyte monocyte progenitor cell | 1.73e-08 | 67 |
classical monocyte | 3.69e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-08 | 42 |
defensive cell | 4.39e-07 | 48 |
phagocyte | 4.39e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
vagina | 8.62e-12 | 1 |
immune system | 3.13e-09 | 93 |
hematopoietic system | 1.08e-08 | 98 |
blood island | 1.08e-08 | 98 |
hemolymphoid system | 9.22e-08 | 108 |
bone marrow | 2.21e-07 | 76 |
bone element | 8.88e-07 | 82 |