FFCP PHASE1:Hg19::chr16:87865427..87865438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8140 | |EntrezGene=8140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11063 | |HGNC=11063 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=385bp_to_BC014177_5end | |association_with_transcript=385bp_to_BC014177_5end | ||
|cluster_id=chr16:87865427..87865438,- | |||
|description=CAGE_peak_28_at_SLC7A5_5end | |description=CAGE_peak_28_at_SLC7A5_5end | ||
|id=chr16:87865427..87865438,- | |id=chr16:87865427..87865438,- | ||
|ontology_enrichment_celltype=CL:0002252;6.72e-26;1!CL:0002231;1.01e-09;3!CL:0002577;1.47e-09;3!CL:0000307;1.47e-09;3!CL:0002076;1.74e-09;42 | |ontology_enrichment_celltype=CL:0000223!2.31e-09!59;CL:0000066!1.09e-08!254;CL:0002076!1.25e-08!43;CL:0002231!8.72e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002252;6.72e-26;1!CL:0002231;1.01e-09;3!CL:0002577;1.47e-09;3!CL:0000307;1.47e-09;3!CL:0002076;1.74e-09;42 | ||
|ontology_enrichment_disease=DOID:1749;5.00e-08;14 | |ontology_enrichment_celltype_v019_2=CL:0002252,5.93e-26,1;CL:0002076,6.90e-10,42;CL:0002231,1.01e-09,3;CL:0002577,1.19e-09,3;CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0000223,2.90e-07,58 | ||
|ontology_enrichment_uberon=UBERON:0001043;1.47e-09;3!UBERON:0001987;1.75e-07;4!UBERON:0003343;1.75e-07;4!UBERON:0004785;1.75e-07;4 | |ontology_enrichment_development_v019=CL:0000377;1.47e-09;3 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;5.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.82e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!5.50e-09!5;UBERON:0003343!8.53e-08!4;UBERON:0004785!8.53e-08!4;UBERON:0000161!4.55e-07!35;UBERON:0004119!4.81e-07!169;UBERON:0000925!4.81e-07!169;UBERON:0006595!4.81e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001043;1.47e-09;3!UBERON:0001987;1.75e-07;4!UBERON:0003343;1.75e-07;4!UBERON:0004785;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,1.41e-09,3;UBERON:0009143,1.41e-09,3;UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4;UBERON:0003343,1.59e-07,4;UBERON:0004785,1.59e-07,4 | |||
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| ||
|short_description=p28@SLC7A5 | |short_description=p28@SLC7A5 | ||
}} | }} |
Latest revision as of 08:13, 18 September 2015
Short description: | p28@SLC7A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_SLC7A5_5end |
Coexpression cluster: | NA |
Association with transcript: | 385bp_to_BC014177_5end |
EntrezGene: | SLC7A5 |
HGNC: | 11063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 5.93e-26 | 1 |
endo-epithelial cell | 6.90e-10 | 42 |
epithelial cell of prostate | 1.01e-09 | 3 |
placental epithelial cell | 1.19e-09 | 3 |
duct epithelial cell | 1.81e-09 | 3 |
branched duct epithelial cell | 1.81e-09 | 3 |
tracheal epithelial cell | 1.81e-09 | 3 |
tracheoblast | 1.81e-09 | 3 |
endodermal cell | 2.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
esophagus | 1.41e-09 | 3 |
esophageal region | 1.41e-09 | 3 |
placenta | 1.49e-07 | 4 |
allantois | 1.49e-07 | 4 |
mucosa of oral region | 1.59e-07 | 4 |
respiratory system mucosa | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.82e-08 | 14 |