FFCP PHASE1:Hg19::chr17:79803082..79803112,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5034 | |EntrezGene=5034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8548 | |HGNC=8548 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=219bp_to_ENST00000473021_5end | |association_with_transcript=219bp_to_ENST00000473021_5end | ||
|cluster_id=chr17:79803082..79803112,- | |||
|coexpression_cluster_id=C846 | |coexpression_cluster_id=C846 | ||
|description=CAGE_peak_6_at_P4HB_5end | |description=CAGE_peak_6_at_P4HB_5end | ||
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|ontology_enrichment_celltype=CL:0000548!5.38e-15!679;CL:0000004!5.38e-15!679;CL:0000255!5.38e-15!679;CL:0000012!3.55e-14!682;CL:0000144!1.31e-12!625;CL:0002371!2.67e-11!591;CL:0000055!1.26e-09!180;CL:0000220!3.29e-08!246;CL:0000222!3.78e-08!119;CL:0002321!4.86e-08!248;CL:0000680!9.69e-08!57;CL:0000056!9.69e-08!57;CL:0000355!9.69e-08!57;CL:0000063!1.59e-07!578;CL:0000057!1.71e-07!75;CL:0000192!3.12e-07!42;CL:0000514!3.12e-07!42;CL:0000183!4.23e-07!59;CL:0000187!5.66e-07!54;CL:0000003!7.96e-07!722 | |ontology_enrichment_celltype=CL:0000548!5.38e-15!679;CL:0000004!5.38e-15!679;CL:0000255!5.38e-15!679;CL:0000012!3.55e-14!682;CL:0000144!1.31e-12!625;CL:0002371!2.67e-11!591;CL:0000055!1.26e-09!180;CL:0000220!3.29e-08!246;CL:0000222!3.78e-08!119;CL:0002321!4.86e-08!248;CL:0000680!9.69e-08!57;CL:0000056!9.69e-08!57;CL:0000355!9.69e-08!57;CL:0000063!1.59e-07!578;CL:0000057!1.71e-07!75;CL:0000192!3.12e-07!42;CL:0000514!3.12e-07!42;CL:0000183!4.23e-07!59;CL:0000187!5.66e-07!54;CL:0000003!7.96e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000134;7.23e-10;55!CL:0000048;1.79e-08;58!CL:0000723;1.28e-07;61 | |ontology_enrichment_celltype_v019=CL:0000134;7.23e-10;55!CL:0000048;1.79e-08;58!CL:0000723;1.28e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.40e-09,427;CL:0000723,1.06e-08,433;CL:0000057,3.42e-08,76;CL:0000034,5.18e-08,441;CL:0000680,4.31e-07,58;CL:0000056,4.31e-07,58;CL:0000355,4.31e-07,58;CL:0000192,6.61e-07,43;CL:0000514,6.61e-07,43;CL:0000222,8.07e-07,121 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!4.91e-08!14 | |ontology_enrichment_disease=DOID:2394!4.91e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.50e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;1.50e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.84e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.14e-12!143;UBERON:0002100!3.26e-11!216;UBERON:0003914!2.34e-09!118;UBERON:0000490!3.43e-09!138;UBERON:0000926!4.45e-09!448;UBERON:0004120!4.45e-09!448;UBERON:0006603!4.45e-09!448;UBERON:0003104!2.09e-08!238;UBERON:0009142!2.09e-08!238;UBERON:0004290!3.34e-08!70;UBERON:0000914!8.23e-08!83;UBERON:0002329!8.23e-08!83;UBERON:0003077!8.23e-08!83;UBERON:0003059!8.23e-08!83;UBERON:0007282!8.23e-08!83;UBERON:0009618!8.23e-08!83;UBERON:0007285!8.23e-08!83;UBERON:0009569!8.78e-08!113;UBERON:0001134!1.04e-07!61;UBERON:0002036!1.04e-07!61;UBERON:0003082!1.04e-07!61;UBERON:0002385!1.79e-07!63;UBERON:0001015!1.79e-07!63;UBERON:0000383!1.79e-07!63;UBERON:0000486!2.57e-07!82;UBERON:0004573!5.89e-07!33;UBERON:0004571!5.89e-07!33 | |ontology_enrichment_uberon=UBERON:0005256!2.14e-12!143;UBERON:0002100!3.26e-11!216;UBERON:0003914!2.34e-09!118;UBERON:0000490!3.43e-09!138;UBERON:0000926!4.45e-09!448;UBERON:0004120!4.45e-09!448;UBERON:0006603!4.45e-09!448;UBERON:0003104!2.09e-08!238;UBERON:0009142!2.09e-08!238;UBERON:0004290!3.34e-08!70;UBERON:0000914!8.23e-08!83;UBERON:0002329!8.23e-08!83;UBERON:0003077!8.23e-08!83;UBERON:0003059!8.23e-08!83;UBERON:0007282!8.23e-08!83;UBERON:0009618!8.23e-08!83;UBERON:0007285!8.23e-08!83;UBERON:0009569!8.78e-08!113;UBERON:0001134!1.04e-07!61;UBERON:0002036!1.04e-07!61;UBERON:0003082!1.04e-07!61;UBERON:0002385!1.79e-07!63;UBERON:0001015!1.79e-07!63;UBERON:0000383!1.79e-07!63;UBERON:0000486!2.57e-07!82;UBERON:0004573!5.89e-07!33;UBERON:0004571!5.89e-07!33 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,3.88e-11,122;UBERON:0002100,4.02e-11,199;UBERON:0003104,3.95e-10,160;UBERON:0009142,3.95e-10,160;UBERON:0007503,3.57e-08,78;UBERON:0003914,5.75e-08,117;UBERON:0009569,9.85e-08,112;UBERON:0007524,1.40e-07,73;UBERON:0000490,1.72e-07,148;UBERON:0002329,1.90e-07,71;UBERON:0003059,1.90e-07,71;UBERON:0007282,1.90e-07,71;UBERON:0004290,1.90e-07,71;UBERON:0009618,1.90e-07,71;UBERON:0003077,3.81e-07,72;UBERON:0007285,3.81e-07,72;UBERON:0002417,4.59e-07,60;UBERON:0000916,4.59e-07,60;UBERON:0001134,5.67e-07,62;UBERON:0002036,5.67e-07,62;UBERON:0003082,5.67e-07,62 | |||
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| ||
|short_description=p6@P4HB | |short_description=p6@P4HB | ||
}} | }} |
Latest revision as of 08:30, 18 September 2015
Short description: | p6@P4HB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_P4HB_5end |
Coexpression cluster: | C846_pancreas_leiomyoma_Smooth_tenocyte_Fibroblast_Adipocyte_Hepatocyte |
Association with transcript: | 219bp_to_ENST00000473021_5end |
EntrezGene: | P4HB |
HGNC: | 8548 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.40e-09 | 427 |
somatic stem cell | 1.06e-08 | 433 |
fibroblast | 3.42e-08 | 76 |
stem cell | 5.18e-08 | 441 |
muscle precursor cell | 4.31e-07 | 58 |
myoblast | 4.31e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.31e-07 | 58 |
smooth muscle cell | 6.61e-07 | 43 |
smooth muscle myoblast | 6.61e-07 | 43 |
mesodermal cell | 8.07e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 3.88e-11 | 122 |
trunk | 4.02e-11 | 199 |
mesenchyme | 3.95e-10 | 160 |
entire embryonic mesenchyme | 3.95e-10 | 160 |
epithelial vesicle | 3.57e-08 | 78 |
epithelial tube | 5.75e-08 | 117 |
subdivision of trunk | 9.85e-08 | 112 |
dense mesenchyme tissue | 1.40e-07 | 73 |
unilaminar epithelium | 1.72e-07 | 148 |
somite | 1.90e-07 | 71 |
presomitic mesoderm | 1.90e-07 | 71 |
presumptive segmental plate | 1.90e-07 | 71 |
dermomyotome | 1.90e-07 | 71 |
trunk paraxial mesoderm | 1.90e-07 | 71 |
paraxial mesoderm | 3.81e-07 | 72 |
presumptive paraxial mesoderm | 3.81e-07 | 72 |
abdominal segment of trunk | 4.59e-07 | 60 |
abdomen | 4.59e-07 | 60 |
skeletal muscle tissue | 5.67e-07 | 62 |
striated muscle tissue | 5.67e-07 | 62 |
myotome | 5.67e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.84e-09 | 14 |