FFCP PHASE1:Hg19::chr15:59908741..59908754,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000560210_5end | |association_with_transcript=11bp_to_ENST00000560210_5end | ||
|cluster_id=chr15:59908741..59908754,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_12_at_GCNT3_5end | |description=CAGE_peak_12_at_GCNT3_5end | ||
|id=chr15:59908741..59908754,+ | |id=chr15:59908741..59908754,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.36e-10!43;CL:0002368!6.42e-10!13;CL:0000223!1.35e-09!59 | |ontology_enrichment_celltype=CL:0002076!2.36e-10!43;CL:0002368!6.42e-10!13;CL:0000223!1.35e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000167;3.08e-14;1!CL:0000164;3.08e-14;1!CL:0000502;3.08e-14;1!CL:0000172;3.08e-14;1!CL:0000173;3.08e-14;1!CL:0002553;5.14e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.08e-14,1;CL:0000164,3.08e-14,1;CL:0000502,3.08e-14,1;CL:0000172,3.08e-14,1;CL:0000173,3.08e-14,1;CL:0002351,3.08e-14,1;CL:0002553,5.15e-14,1 | |||
|ontology_enrichment_development_v019=CL:0002351;3.08e-14;1!UBERON:0001045;1.10e-13;1!UBERON:0006298;1.10e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;3.08e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.08e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.44e-14!169;UBERON:0000925!2.44e-14!169;UBERON:0006595!2.44e-14!169;UBERON:0004921!8.89e-14!129;UBERON:0004185!8.89e-14!129;UBERON:0001007!1.87e-10!155;UBERON:0001555!1.87e-10!155;UBERON:0007026!1.87e-10!155;UBERON:0003127!2.20e-09!2;UBERON:0000077!4.05e-09!130;UBERON:0001004!1.13e-08!72;UBERON:0000065!6.22e-08!53;UBERON:0005409!5.10e-07!35;UBERON:0001046!8.66e-07!19;UBERON:0000464!8.84e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.44e-25;2!UBERON:0001154;1.10e-13;1!UBERON:0001736;1.10e-13;1!UBERON:0001153;1.10e-13;1!UBERON:0009854;1.10e-13;1!UBERON:0003126;5.47e-08;7!UBERON:0001005;5.47e-08;7!UBERON:0000341;1.75e-07;2!UBERON:0006562;1.75e-07;2!UBERON:0001829;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,6.76e-26,2;UBERON:0001736,7.55e-14,1;UBERON:0006298,7.55e-14,1;UBERON:0001154,1.25e-13,1;UBERON:0001153,1.25e-13,1;UBERON:0001045,1.25e-13,1;UBERON:0003126,4.42e-08,7;UBERON:0001005,4.42e-08,7;UBERON:0001829,1.45e-07,2;UBERON:0004921,2.03e-07,118;UBERON:0000341,2.12e-07,2 | |||
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| ||
|short_description=p12@GCNT3 | |short_description=p12@GCNT3 | ||
}} | }} |
Latest revision as of 09:10, 18 September 2015
Short description: | p12@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GCNT3_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 11bp_to_ENST00000560210_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.08e-14 | 1 |
enteroendocrine cell | 3.08e-14 | 1 |
type D enteroendocrine cell | 3.08e-14 | 1 |
somatostatin secreting cell | 3.08e-14 | 1 |
pancreatic D cell | 3.08e-14 | 1 |
progenitor cell of endocrine pancreas | 3.08e-14 | 1 |
lung fibroblast | 5.15e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 6.76e-26 | 2 |
submandibular gland | 7.55e-14 | 1 |
submandibular gland primordium | 7.55e-14 | 1 |
vermiform appendix | 1.25e-13 | 1 |
caecum | 1.25e-13 | 1 |
midgut | 1.25e-13 | 1 |
trachea | 4.42e-08 | 7 |
respiratory airway | 4.42e-08 | 7 |
major salivary gland | 1.45e-07 | 2 |
subdivision of digestive tract | 2.03e-07 | 118 |
throat | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.08e-14 | 1 |