FFCP PHASE1:Hg19::chr4:71063815..71063857,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54959 | |EntrezGene=54959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26043 | |HGNC=26043 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000510847_5end | |association_with_transcript=0bp_to_ENST00000510847_5end | ||
|cluster_id=chr4:71063815..71063857,+ | |||
|coexpression_cluster_id=C37 | |coexpression_cluster_id=C37 | ||
|description=CAGE_peak_1_at_ODAM_5end | |description=CAGE_peak_1_at_ODAM_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!8.43e-07!12;CL:0000417!8.43e-07!12;CL:0000668!8.43e-07!12;CL:0000414!8.43e-07!12;CL:0000412!8.43e-07!12;CL:0000182!8.43e-07!12 | |ontology_enrichment_celltype=CL:0000181!8.43e-07!12;CL:0000417!8.43e-07!12;CL:0000668!8.43e-07!12;CL:0000414!8.43e-07!12;CL:0000412!8.43e-07!12;CL:0000182!8.43e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002537;6.46e-08;5 | |ontology_enrichment_celltype_v019=CL:0002537;6.46e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,6.31e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.22e-08;2 | |ontology_enrichment_development_v019=UBERON:0007297;1.22e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;6.85e-09;2 | |ontology_enrichment_disease_v019=DOID:3493;6.85e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,6.59e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.04e-12!14;UBERON:0000158!9.04e-12!14;UBERON:0004119!1.29e-10!169;UBERON:0000925!1.29e-10!169;UBERON:0006595!1.29e-10!169;UBERON:0004921!1.75e-10!129;UBERON:0004185!1.75e-10!129;UBERON:0001007!2.11e-10!155;UBERON:0001555!2.11e-10!155;UBERON:0007026!2.11e-10!155;UBERON:0000077!1.07e-09!130;UBERON:0003124!5.17e-09!7;UBERON:0000478!1.05e-08!24;UBERON:0001041!4.00e-07!98;UBERON:0006947!6.62e-07!3;UBERON:0004054!6.62e-07!3;UBERON:0007023!8.42e-07!115 | |ontology_enrichment_uberon=UBERON:0005631!9.04e-12!14;UBERON:0000158!9.04e-12!14;UBERON:0004119!1.29e-10!169;UBERON:0000925!1.29e-10!169;UBERON:0006595!1.29e-10!169;UBERON:0004921!1.75e-10!129;UBERON:0004185!1.75e-10!129;UBERON:0001007!2.11e-10!155;UBERON:0001555!2.11e-10!155;UBERON:0007026!2.11e-10!155;UBERON:0000077!1.07e-09!130;UBERON:0003124!5.17e-09!7;UBERON:0000478!1.05e-08!24;UBERON:0001041!4.00e-07!98;UBERON:0006947!6.62e-07!3;UBERON:0004054!6.62e-07!3;UBERON:0007023!8.42e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.70e-12;3!UBERON:0004054;3.70e-12;3!UBERON:0005631;1.41e-09;10!UBERON:0000158;1.41e-09;10!UBERON:0001829;2.09e-09;2!UBERON:0005904;3.16e-09;4!UBERON:0000341;2.04e-08;2!UBERON:0001041;4.95e-07;14!UBERON:0000478;6.93e-07;24!UBERON:0001044;7.95e-07;6!UBERON:0003293;7.95e-07;6!UBERON:0003294;7.95e-07;6!UBERON:0010047;7.95e-07;6!UBERON:0003408;7.95e-07;6!UBERON:0000167;7.95e-07;6!UBERON:0004921;8.24e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0006947;3.70e-12;3!UBERON:0004054;3.70e-12;3!UBERON:0005631;1.41e-09;10!UBERON:0000158;1.41e-09;10!UBERON:0001829;2.09e-09;2!UBERON:0005904;3.16e-09;4!UBERON:0000341;2.04e-08;2!UBERON:0001041;4.95e-07;14!UBERON:0000478;6.93e-07;24!UBERON:0001044;7.95e-07;6!UBERON:0003293;7.95e-07;6!UBERON:0003294;7.95e-07;6!UBERON:0010047;7.95e-07;6!UBERON:0003408;7.95e-07;6!UBERON:0000167;7.95e-07;6!UBERON:0004921;8.24e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.37e-12,3;UBERON:0004054,3.37e-12,3;UBERON:0001829,2.09e-09,2;UBERON:0005631,2.73e-09,14;UBERON:0000158,2.73e-09,14;UBERON:0005904,2.95e-09,4;UBERON:0000341,1.93e-08,2;UBERON:0001007,2.40e-08,145;UBERON:0001555,2.40e-08,145;UBERON:0007026,2.40e-08,145;UBERON:0004921,3.30e-08,118;UBERON:0004119,7.00e-08,160;UBERON:0000925,7.00e-08,160;UBERON:0006595,7.00e-08,160;UBERON:0002530,4.14e-07,59;UBERON:0000478,6.80e-07,24;UBERON:0001044,7.95e-07,6;UBERON:0003293,7.95e-07,6;UBERON:0003294,7.95e-07,6;UBERON:0010047,7.95e-07,6;UBERON:0000167,7.95e-07,6;UBERON:0001041,8.58e-07,87 | |||
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| ||
|short_description=p1@ODAM | |short_description=p1@ODAM | ||
}} | }} |
Latest revision as of 09:42, 18 September 2015
Short description: | p1@ODAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ODAM_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000510847_5end |
EntrezGene: | ODAM |
HGNC: | 26043 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 6.31e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.37e-12 | 3 |
internal male genitalia | 3.37e-12 | 3 |
major salivary gland | 2.09e-09 | 2 |
extraembryonic membrane | 2.73e-09 | 14 |
membranous layer | 2.73e-09 | 14 |
duct of male reproductive system | 2.95e-09 | 4 |
throat | 1.93e-08 | 2 |
digestive system | 2.40e-08 | 145 |
digestive tract | 2.40e-08 | 145 |
primitive gut | 2.40e-08 | 145 |
subdivision of digestive tract | 3.30e-08 | 118 |
endoderm-derived structure | 7.00e-08 | 160 |
endoderm | 7.00e-08 | 160 |
presumptive endoderm | 7.00e-08 | 160 |
gland | 4.14e-07 | 59 |
extraembryonic structure | 6.80e-07 | 24 |
saliva-secreting gland | 7.95e-07 | 6 |
gland of oral region | 7.95e-07 | 6 |
gland of foregut | 7.95e-07 | 6 |
oral gland | 7.95e-07 | 6 |
oral cavity | 7.95e-07 | 6 |
foregut | 8.58e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.59e-09 | 2 |