FFCP PHASE1:Hg19::chr17:7990883..7990893,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7990883..7990893,-
|short_description=p5@ALOX12B
|description=CAGE_peak_5_at_ALOX12B_5end
|association_with_transcript=127bp_to_NM_001139,uc002gjy.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=242 | |EntrezGene=242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=430 | |HGNC=430 | ||
|TSSclassifier=strong | |||
|UniProt=O75342 | |UniProt=O75342 | ||
|association_with_transcript=127bp_to_NM_001139,uc002gjy.1_5end | |||
|cluster_id=chr17:7990883..7990893,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_5_at_ALOX12B_5end | |||
|id=chr17:7990883..7990893,- | |||
|ontology_enrichment_celltype=CL:0002159!4.92e-32!13;CL:0000362!5.50e-27!8;CL:0000240!4.43e-23!6;CL:0000311!4.43e-23!6;CL:0000079!4.43e-23!6;CL:0000237!4.43e-23!6;CL:0000036!4.43e-23!6;CL:0000357!4.43e-23!6;CL:0000114!4.43e-23!6;CL:0000575!1.31e-18!2;CL:0000317!1.87e-18!2;CL:1000448!1.87e-18!2;CL:0002308!1.87e-18!2;CL:0002140!1.87e-18!2;CL:0000312!3.54e-16!5;CL:0000076!2.40e-12!62;CL:0002077!3.33e-12!33;CL:0002336!1.07e-09!1;CL:0002261!1.07e-09!1;CL:0002170!1.07e-09!1;CL:0000622!6.31e-08!5;CL:0000035!4.59e-07!20;CL:0000154!9.69e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000312;2.97e-09;5!CL:0000240;6.34e-08;6!CL:0000311;6.34e-08;6!CL:0000079;6.34e-08;6!CL:0000237;6.34e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,2.97e-09,5;CL:0000240,6.34e-08,6;CL:0000311,6.34e-08,6;CL:0000079,6.34e-08,6;CL:0000237,6.34e-08,6;CL:0000036,6.34e-08,6;CL:0000357,6.34e-08,6;CL:0000114,6.34e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.81e-21;2!UBERON:0010056;3.81e-21;2!CL:0000357;6.34e-08;6!CL:0000114;6.34e-08;6 | |||
|ontology_enrichment_disease=DOID:3151!2.37e-10!1;DOID:3149!2.37e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.70e-40;1!DOID:3149;2.70e-40;1!DOID:3451;6.30e-21;2!DOID:4159;6.30e-21;2!DOID:0060122;6.30e-21;2!DOID:4362;2.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.30e-40,1;DOID:3149,3.30e-40,1;DOID:3451,6.96e-21,2;DOID:4159,6.96e-21,2;DOID:0060122,6.96e-21,2;DOID:4362,2.53e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002419!1.87e-18!2;UBERON:0007771!1.87e-18!2;UBERON:0003297!1.87e-18!2;UBERON:0001821!1.87e-18!2;UBERON:0003487!1.87e-18!2;UBERON:0001820!1.87e-18!2;UBERON:0005089!1.87e-18!2;UBERON:0005088!1.87e-18!2;UBERON:0001003!2.12e-15!14;UBERON:0007376!2.12e-15!14;UBERON:0007383!2.12e-15!14;UBERON:0003102!2.93e-13!95;UBERON:0001723!9.95e-13!3;UBERON:0001033!9.95e-13!3;UBERON:0010056!9.95e-13!3;UBERON:0002372!5.30e-10!1;UBERON:0001961!5.30e-10!1;UBERON:0001744!5.30e-10!1;UBERON:0001735!5.30e-10!1;UBERON:0000964!9.02e-10!4;UBERON:0004348!9.02e-10!4;UBERON:0005427!9.02e-10!4;UBERON:0000997!9.82e-10!1;UBERON:0005056!9.82e-10!1;UBERON:0001042!1.91e-08!10;UBERON:0009145!1.91e-08!10;UBERON:0001444!3.90e-08!48;UBERON:0006562!1.01e-07!11;UBERON:0000165!1.34e-07!28;UBERON:0000930!1.34e-07!28;UBERON:0002097!2.07e-07!40;UBERON:0005085!2.16e-07!29;UBERON:0000002!6.46e-07!6;UBERON:0001560!6.46e-07!6;UBERON:0000166!7.54e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;2.70e-40;1!UBERON:0001723;1.40e-14;3!UBERON:0001033;1.40e-14;3!UBERON:0000014;3.60e-11;4!UBERON:0002050;3.35e-09;5!UBERON:0005423;3.35e-09;5!UBERON:0000002;5.54e-08;6!UBERON:0001560;5.54e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.40e-14,3;UBERON:0001033,1.40e-14,3;UBERON:0010056,1.40e-14,3;UBERON:0000014,3.79e-11,4;UBERON:0005795,3.04e-08,22;UBERON:0000002,5.54e-08,6;UBERON:0001560,5.54e-08,6 | |||
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|short_description=p5@ALOX12B | |||
}} | }} |
Latest revision as of 09:45, 18 September 2015
Short description: | p5@ALOX12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALOX12B_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | 127bp_to_NM_001139, uc002gjy.1_5end |
EntrezGene: | ALOX12B |
HGNC: | 430 |
UniProt: | O75342 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 2.97e-09 | 5 |
stratified squamous epithelial cell | 6.34e-08 | 6 |
keratin accumulating cell | 6.34e-08 | 6 |
stratified epithelial cell | 6.34e-08 | 6 |
keratinizing barrier epithelial cell | 6.34e-08 | 6 |
epithelial fate stem cell | 6.34e-08 | 6 |
stratified epithelial stem cell | 6.34e-08 | 6 |
surface ectodermal cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.40e-14 | 3 |
gustatory system | 1.40e-14 | 3 |
future tongue | 1.40e-14 | 3 |
zone of skin | 3.79e-11 | 4 |
embryonic uterus | 3.04e-08 | 22 |
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.30e-40 | 1 |
keratoacanthoma | 3.30e-40 | 1 |
skin carcinoma | 6.96e-21 | 2 |
skin cancer | 6.96e-21 | 2 |
integumentary system cancer | 6.96e-21 | 2 |
cervical cancer | 2.53e-09 | 5 |