FFCP PHASE1:Hg19::chr10:5090940..5090983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8644 | |EntrezGene=8644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=386 | |HGNC=386 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NM_001253908_5end | |association_with_transcript=0bp_to_NM_001253908_5end | ||
|cluster_id=chr10:5090940..5090983,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_AKR1C3_5end | |description=CAGE_peak_5_at_AKR1C3_5end | ||
|id=chr10:5090940..5090983,+ | |id=chr10:5090940..5090983,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.07e-11!12;CL:0000417!1.07e-11!12;CL:0000668!1.07e-11!12;CL:0000414!1.07e-11!12;CL:0000412!1.07e-11!12;CL:0000182!1.07e-11!12;CL:0000223!2.96e-08!59 | |ontology_enrichment_celltype=CL:0000181!1.07e-11!12;CL:0000417!1.07e-11!12;CL:0000668!1.07e-11!12;CL:0000414!1.07e-11!12;CL:0000412!1.07e-11!12;CL:0000182!1.07e-11!12;CL:0000223!2.96e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000319;7.62e-26;1!CL:0000182;2.12e-19;12!CL:0000159;1.21e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,7.62e-26,1;CL:0000182,2.12e-19,12;CL:0000159,1.21e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.11e-25;1!UBERON:0004161;6.32e-21;11!UBERON:0009497;7.87e-18;13!UBERON:0003104;2.46e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;7.62e-26;1!DOID:3493;1.07e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.62e-26,1;DOID:3493,1.07e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.47e-12!19;UBERON:0006925!1.47e-12!19;UBERON:0008836!1.47e-12!19;UBERON:0009497!1.09e-11!25;UBERON:0000015!1.09e-11!25;UBERON:0002423!1.09e-11!25;UBERON:0006235!1.09e-11!25;UBERON:0004161!1.09e-11!25;UBERON:0008835!1.18e-10!22;UBERON:0003894!1.18e-10!22;UBERON:0009854!3.95e-10!23;UBERON:0007499!3.30e-09!25;UBERON:0005057!8.43e-09!26;UBERON:0009856!8.43e-09!26;UBERON:0005172!6.39e-08!55;UBERON:0005173!6.39e-08!55;UBERON:0002365!3.68e-07!31;UBERON:0002330!3.68e-07!31;UBERON:0002417!6.71e-07!61;UBERON:0000916!6.71e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.62e-25;25!UBERON:0002107;1.88e-21;19!UBERON:0006925;1.88e-21;19!UBERON:0002365;3.21e-13;31!UBERON:0002330;3.21e-13;31!UBERON:0002368;1.16e-12;33!UBERON:0002110;1.74e-09;3!UBERON:0005172;4.36e-08;52!UBERON:0005173;4.36e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,4.73e-25,25;UBERON:0000015,4.73e-25,25;UBERON:0002423,4.73e-25,25;UBERON:0006235,4.73e-25,25;UBERON:0004161,4.73e-25,25;UBERON:0002107,1.88e-21,19;UBERON:0006925,1.88e-21,19;UBERON:0008836,1.88e-21,19;UBERON:0008835,1.33e-18,22;UBERON:0003894,1.33e-18,22;UBERON:0009854,8.09e-18,23;UBERON:0007499,1.95e-16,25;UBERON:0009856,8.00e-16,26;UBERON:0002365,2.38e-13,31;UBERON:0002330,2.38e-13,31;UBERON:0002368,7.06e-12,35;UBERON:0003929,9.00e-12,54;UBERON:0005172,9.00e-12,54;UBERON:0005173,9.00e-12,54;UBERON:0002417,1.28e-10,60;UBERON:0000916,1.28e-10,60;UBERON:0002110,1.81e-09,3;UBERON:0006242,1.81e-09,3;UBERON:0000949,2.48e-09,45;UBERON:0005911,8.06e-08,82;UBERON:0002530,3.33e-07,59 | |||
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| ||
|short_description=p5@AKR1C3 | |short_description=p5@AKR1C3 | ||
}} | }} |
Latest revision as of 10:14, 18 September 2015
Short description: | p5@AKR1C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AKR1C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_NM_001253908_5end |
EntrezGene: | AKR1C3 |
HGNC: | 386 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 7.62e-26 | 1 |
hepatocyte | 2.12e-19 | 12 |
seromucus secreting cell | 1.21e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 4.73e-25 | 25 |
anatomical boundary | 4.73e-25 | 25 |
hepatobiliary system | 4.73e-25 | 25 |
foregut-midgut junction | 4.73e-25 | 25 |
septum transversum | 4.73e-25 | 25 |
liver | 1.88e-21 | 19 |
digestive gland | 1.88e-21 | 19 |
liver bud | 1.88e-21 | 19 |
hepatic diverticulum | 1.33e-18 | 22 |
liver primordium | 1.33e-18 | 22 |
digestive tract diverticulum | 8.09e-18 | 23 |
epithelial sac | 1.95e-16 | 25 |
sac | 8.00e-16 | 26 |
exocrine gland | 2.38e-13 | 31 |
exocrine system | 2.38e-13 | 31 |
endocrine gland | 7.06e-12 | 35 |
gut epithelium | 9.00e-12 | 54 |
abdomen element | 9.00e-12 | 54 |
abdominal segment element | 9.00e-12 | 54 |
abdominal segment of trunk | 1.28e-10 | 60 |
abdomen | 1.28e-10 | 60 |
gallbladder | 1.81e-09 | 3 |
gall bladder primordium | 1.81e-09 | 3 |
endocrine system | 2.48e-09 | 45 |
endo-epithelium | 8.06e-08 | 82 |
gland | 3.33e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.62e-26 | 1 |
signet ring cell adenocarcinoma | 1.07e-13 | 2 |