FFCP PHASE1:Hg19::chr3:46204959..46204979,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1232 | |EntrezGene=1232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1604 | |HGNC=1604 | ||
|TSSclassifier=strong | |||
|UniProt=P51677 | |UniProt=P51677 | ||
|association_with_transcript=-116bp_to_ENST00000357422,uc003cpg.1_5end | |association_with_transcript=-116bp_to_ENST00000357422,uc003cpg.1_5end | ||
|cluster_id=chr3:46204959..46204979,+ | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_3_at_CCR3_5end | |description=CAGE_peak_3_at_CCR3_5end | ||
|id=chr3:46204959..46204979,+ | |id=chr3:46204959..46204979,+ | ||
|ontology_enrichment_celltype=CL:0000159;6.13e-20;2!CL:0002541;6.55e-13;3!CL:0000319;6.73e-11;1!CL:0000313;8.53e-11;1!CL:0000083;4.44e-10;4!CL:0002563;4.44e-10;4 | |ontology_enrichment_celltype=CL:0000066!2.43e-22!254;CL:0002076!1.56e-18!43;CL:0000223!5.26e-16!59;CL:0002251!3.45e-11!21;CL:0002541!9.67e-08!3;CL:0000039!3.11e-07!7;CL:0000586!3.11e-07!7 | ||
| | |ontology_enrichment_celltype_v019=CL:0000159;6.13e-20;2!CL:0002541;6.55e-13;3!CL:0000319;6.73e-11;1!CL:0000313;8.53e-11;1!CL:0000083;4.44e-10;4!CL:0002563;4.44e-10;4 | ||
|ontology_enrichment_disease=DOID:3030;6.73e-11;1!DOID:2152;8.53e-11;1!DOID:1799;1.19e-10;1!DOID:10165;1.19e-10;1!DOID:1798;1.19e-10;1!DOID:1749;1.49e-10;14!DOID:0050619;2.62e-10;1!DOID:1357;2.62e-10;1!DOID:1793;4.44e-10;4!DOID:299;3.49e-09;25!DOID:170;5.33e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0000159,5.87e-20,2;CL:0002541,4.84e-13,3;CL:0000319,6.73e-11,1;CL:0000313,8.14e-11,1;CL:0002563,3.46e-10,4;CL:0000083,4.35e-10,4;CL:0000066,1.41e-07,253;CL:0000223,5.54e-07,58 | ||
|ontology_enrichment_uberon=UBERON:0003124;6.55e-13;3!UBERON:0000920;6.55e-13;3!UBERON:0004911;8.53e-11;1!UBERON:0001764;2.62e-10;1!UBERON:0001825;2.62e-10;1!UBERON:0001242;4.44e-10;4!UBERON:0001262;4.44e-10;4!UBERON:0004786;4.44e-10;4!UBERON:0004808;4.44e-10;4!UBERON:0001277;4.44e-10;4!UBERON:0005631;1.25e-08;10!UBERON:0000158;1.25e-08;10 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!5.25e-27!106;DOID:0050687!3.70e-21!143;DOID:1749!9.37e-14!14;DOID:162!6.65e-11!235;DOID:14566!2.12e-10!239;DOID:299!2.96e-08!25;DOID:0050615!2.17e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3030;6.73e-11;1!DOID:2152;8.53e-11;1!DOID:1799;1.19e-10;1!DOID:10165;1.19e-10;1!DOID:1798;1.19e-10;1!DOID:1749;1.49e-10;14!DOID:0050619;2.62e-10;1!DOID:1357;2.62e-10;1!DOID:1793;4.44e-10;4!DOID:299;3.49e-09;25!DOID:170;5.33e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.72e-14,106;DOID:0050687,7.45e-12,143;DOID:3030,6.73e-11,1;DOID:2152,8.14e-11,1;DOID:1799,1.19e-10,1;DOID:10165,1.19e-10,1;DOID:1798,1.19e-10,1;DOID:0050619,2.08e-10,1;DOID:1357,2.08e-10,1;DOID:1749,2.09e-10,14;DOID:1793,4.35e-10,4;DOID:299,3.26e-09,25;DOID:162,3.22e-07,235;DOID:14566,5.18e-07,239;DOID:170,5.26e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.52e-13!169;UBERON:0000925!3.52e-13!169;UBERON:0006595!3.52e-13!169;UBERON:0005911!1.31e-11!82;UBERON:0005631!2.87e-11!14;UBERON:0000158!2.87e-11!14;UBERON:0001007!1.12e-09!155;UBERON:0001555!1.12e-09!155;UBERON:0007026!1.12e-09!155;UBERON:0005153!5.56e-09!37;UBERON:0001004!1.20e-08!72;UBERON:0000476!9.67e-08!3;UBERON:0000920!9.67e-08!3;UBERON:0000344!1.26e-07!12;UBERON:0000305!1.29e-07!7;UBERON:0005157!2.36e-07!51;UBERON:0002294!2.39e-07!7;UBERON:0001173!2.39e-07!7;UBERON:0004912!2.39e-07!7;UBERON:0000077!2.75e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.55e-13;3!UBERON:0000920;6.55e-13;3!UBERON:0004911;8.53e-11;1!UBERON:0001764;2.62e-10;1!UBERON:0001825;2.62e-10;1!UBERON:0001242;4.44e-10;4!UBERON:0001262;4.44e-10;4!UBERON:0004786;4.44e-10;4!UBERON:0004808;4.44e-10;4!UBERON:0001277;4.44e-10;4!UBERON:0005631;1.25e-08;10!UBERON:0000158;1.25e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.84e-13,3;UBERON:0004911,8.14e-11,1;UBERON:0001764,2.08e-10,1;UBERON:0001825,2.08e-10,1;UBERON:0001242,3.46e-10,4;UBERON:0001262,3.46e-10,4;UBERON:0004786,3.46e-10,4;UBERON:0004808,3.46e-10,4;UBERON:0001277,3.46e-10,4 | |||
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| ||
|short_description=p3@CCR3 | |short_description=p3@CCR3 | ||
}} | }} |
Latest revision as of 10:14, 18 September 2015
Short description: | p3@CCR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCR3_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | -116bp_to_ENST00000357422, uc003cpg.1_5end |
EntrezGene: | CCR3 |
HGNC: | 1604 |
UniProt: | P51677 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 5.87e-20 | 2 |
chorionic membrane mesenchymal stem cell | 4.84e-13 | 3 |
mucus secreting cell | 6.73e-11 | 1 |
serous secreting cell | 8.14e-11 | 1 |
intestinal epithelial cell | 3.46e-10 | 4 |
epithelial cell of pancreas | 4.35e-10 | 4 |
epithelial cell | 1.41e-07 | 253 |
endodermal cell | 5.54e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.84e-13 | 3 |
epithelium of female gonad | 8.14e-11 | 1 |
maxillary sinus | 2.08e-10 | 1 |
paranasal sinus | 2.08e-10 | 1 |
intestinal mucosa | 3.46e-10 | 4 |
wall of intestine | 3.46e-10 | 4 |
gastrointestinal system mucosa | 3.46e-10 | 4 |
gastrointestinal system epithelium | 3.46e-10 | 4 |
intestinal epithelium | 3.46e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.72e-14 | 106 |
cell type cancer | 7.45e-12 | 143 |
mucinous adenocarcinoma | 6.73e-11 | 1 |
ovary epithelial cancer | 8.14e-11 | 1 |
islet cell tumor | 1.19e-10 | 1 |
endocrine pancreas cancer | 1.19e-10 | 1 |
pancreatic endocrine carcinoma | 1.19e-10 | 1 |
paranasal sinus cancer | 2.08e-10 | 1 |
maxillary sinus cancer | 2.08e-10 | 1 |
squamous cell carcinoma | 2.09e-10 | 14 |
pancreatic cancer | 4.35e-10 | 4 |
adenocarcinoma | 3.26e-09 | 25 |
cancer | 3.22e-07 | 235 |
disease of cellular proliferation | 5.18e-07 | 239 |
endocrine gland cancer | 5.26e-07 | 6 |