FFCP PHASE1:Hg19::chr19:43586845..43586863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5670 | |EntrezGene=5670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9519 | |HGNC=9519 | ||
|TSSclassifier=strong | |||
|UniProt=P11465 | |UniProt=P11465 | ||
|association_with_transcript=-25bp_to_ENST00000406487,ENST00000491995_5end | |||
|cluster_id=chr19:43586845..43586863,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_PSG2_5end | |||
|id=chr19:43586845..43586863,- | |||
|ontology_enrichment_celltype=CL:0002541!4.45e-15!3;CL:0000197!8.63e-13!6;CL:0000098!8.63e-13!6;CL:0002167!8.63e-13!6;CL:0002620!6.59e-11!23 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.84e-38;3!CL:0000197;2.74e-33;6!CL:0000098;2.74e-33;6!CL:0002167;2.74e-33;6!CL:0000349;7.63e-11;19!CL:0000710;3.26e-10;20!CL:0000075;1.28e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.62e-38,3;CL:0000197,2.63e-33,6;CL:0000098,2.63e-33,6;CL:0002167,2.63e-33,6;CL:0000349,7.44e-11,19;CL:0000710,3.22e-10,20;CL:0000075,1.27e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.08e-14;1 | |||
|ontology_enrichment_disease=DOID:17!1.63e-14!5;DOID:450!1.63e-14!5;DOID:66!1.63e-14!5;DOID:423!1.63e-14!5;DOID:0080000!1.63e-14!5;DOID:11722!1.63e-14!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;1.42e-13;1!DOID:3451;1.99e-07;2!DOID:4159;1.99e-07;2!DOID:0060122;1.99e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,9.73e-14,1;DOID:3451,1.64e-07,2;DOID:4159,1.64e-07,2;DOID:0060122,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.45e-15!3;UBERON:0000920!4.45e-15!3;UBERON:0005631!1.62e-11!14;UBERON:0000158!1.62e-11!14;UBERON:0003124!3.26e-11!7;UBERON:0002097!2.45e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.84e-38;3!UBERON:0000920;1.84e-38;3!UBERON:0005631;2.42e-20;10!UBERON:0000158;2.42e-20;10!UBERON:0000478;4.18e-13;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.62e-38,3;UBERON:0003124,2.67e-29,7;UBERON:0005631,1.77e-22,14;UBERON:0000158,1.77e-22,14;UBERON:0000478,4.07e-13,24 | |||
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| ||
|short_description=p1@PSG2 | |||
}} | }} |
Latest revision as of 10:29, 18 September 2015
Short description: | p1@PSG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSG2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -25bp_to_ENST00000406487, ENST00000491995_5end |
EntrezGene: | PSG2 |
HGNC: | 9519 |
UniProt: | P11465 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.62e-38 | 3 |
receptor cell | 2.63e-33 | 6 |
sensory epithelial cell | 2.63e-33 | 6 |
olfactory epithelial cell | 2.63e-33 | 6 |
extraembryonic cell | 7.44e-11 | 19 |
neurecto-epithelial cell | 3.22e-10 | 20 |
columnar/cuboidal epithelial cell | 1.27e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.62e-38 | 3 |
chorion | 2.67e-29 | 7 |
extraembryonic membrane | 1.77e-22 | 14 |
membranous layer | 1.77e-22 | 14 |
extraembryonic structure | 4.07e-13 | 24 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 9.73e-14 | 1 |
skin carcinoma | 1.64e-07 | 2 |
skin cancer | 1.64e-07 | 2 |
integumentary system cancer | 1.64e-07 | 2 |