FFCP PHASE1:Hg19::chr19:43690679..43690695,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5673 | |EntrezGene=5673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9522 | |HGNC=9522 | ||
|TSSclassifier=strong | |||
|UniProt=Q15238 | |UniProt=Q15238 | ||
|association_with_transcript=0bp_to_ENST00000366175,NM_001130014,NM_002781,uc002ovu.2,uc002ovv.2,uc002ovw.2,uc002ovx.2_5end | |association_with_transcript=0bp_to_ENST00000366175,NM_001130014,NM_002781,uc002ovu.2,uc002ovv.2,uc002ovw.2,uc002ovx.2_5end | ||
|cluster_id=chr19:43690679..43690695,- | |||
|coexpression_cluster_id=C3801 | |coexpression_cluster_id=C3801 | ||
|description=CAGE_peak_1_at_PSG5_5end | |description=CAGE_peak_1_at_PSG5_5end | ||
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|ontology_enrichment_celltype=CL:0000057!4.63e-20!75;CL:0000055!3.14e-17!180;CL:0002334!3.98e-12!12;CL:0000548!2.83e-11!679;CL:0000004!2.83e-11!679;CL:0000255!2.83e-11!679;CL:0000144!4.36e-11!625;CL:0000012!5.99e-11!682;CL:0002620!5.12e-10!23;CL:0002371!6.49e-08!591;CL:0000077!1.60e-07!19;CL:0000003!5.61e-07!722 | |ontology_enrichment_celltype=CL:0000057!4.63e-20!75;CL:0000055!3.14e-17!180;CL:0002334!3.98e-12!12;CL:0000548!2.83e-11!679;CL:0000004!2.83e-11!679;CL:0000255!2.83e-11!679;CL:0000144!4.36e-11!625;CL:0000012!5.99e-11!682;CL:0002620!5.12e-10!23;CL:0002371!6.49e-08!591;CL:0000077!1.60e-07!19;CL:0000003!5.61e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.05e-16;12!CL:0002620;3.50e-14;23!CL:0000077;2.22e-10;19!CL:0000057;1.87e-08;73!CL:0000349;9.26e-07;19 | |ontology_enrichment_celltype_v019=CL:0002334;8.05e-16;12!CL:0002620;3.50e-14;23!CL:0000077;2.22e-10;19!CL:0000057;1.87e-08;73!CL:0000349;9.26e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.62e-24,76;CL:0002334,7.66e-16,12;CL:0002620,3.97e-14,23;CL:0000077,2.25e-10,19;CL:0000349,9.59e-07,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!6.53e-07!5;DOID:450!6.53e-07!5;DOID:66!6.53e-07!5;DOID:423!6.53e-07!5;DOID:0080000!6.53e-07!5;DOID:11722!6.53e-07!5 | |ontology_enrichment_disease=DOID:17!6.53e-07!5;DOID:450!6.53e-07!5;DOID:66!6.53e-07!5;DOID:423!6.53e-07!5;DOID:0080000!6.53e-07!5;DOID:11722!6.53e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;8.39e-09;5!DOID:450;8.39e-09;5!DOID:66;8.39e-09;5!DOID:423;8.39e-09;5!DOID:0080000;8.39e-09;5!DOID:11722;8.39e-09;5 | |ontology_enrichment_disease_v019=DOID:17;8.39e-09;5!DOID:450;8.39e-09;5!DOID:66;8.39e-09;5!DOID:423;8.39e-09;5!DOID:0080000;8.39e-09;5!DOID:11722;8.39e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,8.41e-09,5;DOID:450,8.41e-09,5;DOID:66,8.41e-09,5;DOID:423,8.41e-09,5;DOID:0080000,8.41e-09,5;DOID:11722,8.41e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.04e-12!14;UBERON:0000158!3.04e-12!14;UBERON:0004923!1.59e-11!57;UBERON:0002199!6.16e-09!45;UBERON:0002416!6.16e-09!45;UBERON:0002097!6.60e-09!40;UBERON:0003102!9.99e-09!95;UBERON:0003124!2.31e-07!7;UBERON:0004871!2.78e-07!8 | |ontology_enrichment_uberon=UBERON:0005631!3.04e-12!14;UBERON:0000158!3.04e-12!14;UBERON:0004923!1.59e-11!57;UBERON:0002199!6.16e-09!45;UBERON:0002416!6.16e-09!45;UBERON:0002097!6.60e-09!40;UBERON:0003102!9.99e-09!95;UBERON:0003124!2.31e-07!7;UBERON:0004871!2.78e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.77e-10;10!UBERON:0000158;2.77e-10;10!UBERON:0002097;7.40e-09;41!UBERON:0004457;2.68e-08;9!UBERON:0000042;2.68e-08;9!UBERON:0003688;3.59e-08;6!UBERON:0002358;3.59e-08;6!UBERON:0003684;3.59e-08;6!UBERON:0001178;3.59e-08;6!UBERON:0002199;5.89e-08;46!UBERON:0002416;5.89e-08;46 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.77e-10;10!UBERON:0000158;2.77e-10;10!UBERON:0002097;7.40e-09;41!UBERON:0004457;2.68e-08;9!UBERON:0000042;2.68e-08;9!UBERON:0003688;3.59e-08;6!UBERON:0002358;3.59e-08;6!UBERON:0003684;3.59e-08;6!UBERON:0001178;3.59e-08;6!UBERON:0002199;5.89e-08;46!UBERON:0002416;5.89e-08;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.43e-12,14;UBERON:0000158,1.43e-12,14;UBERON:0002199,7.90e-12,46;UBERON:0002416,7.90e-12,46;UBERON:0002097,1.89e-11,41;UBERON:0004923,2.24e-11,66;UBERON:0003102,6.93e-10,99;UBERON:0003688,3.42e-08,6;UBERON:0002358,3.42e-08,6;UBERON:0003684,3.42e-08,6;UBERON:0001178,3.42e-08,6;UBERON:0003124,9.87e-08,7;UBERON:0004871,1.65e-07,8 | |||
|phase1_expression=7.26713517082227,3.21150785836475,6.20199378022273,21.0153926541574,2.68176656656373,20.9361245784089,0,0,0,0,0,11.358951350769,10.0231451726812,0,0,1.34465029290355,1.80808358407193,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54565432660823,21.4502872917414,14.9155042789383,2.83734705758686,1.68203280042692,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,22.572054288359,21.5122228472344,0,0,0.505008341862199,0,0.554128230968366,14.9252391099485,23.2930724807255,3.00476117813194,0,264.420323005383,247.51301364072,227.40292994421,212.464496027757,120.15924909202,102.283294398115,92.3139607404685,205.738349002104,156.483830288885,79.264205112652,63.1462304686173,47.3622946479119,312.053431822104,123.925080819998,53.9202683547351,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,19.0390850493111,8.66255378003503,0.118306800039844,0,0.482022059766964,0.330881918197182,0,0,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,2.21379189377604,0.514703430895577,0.658501712451753,0,0,0,4.56131627434455,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,7.49870671894216,7.72717789714754,0.708875486211932,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,5.05282421511254,7.28052058379563,0,0,0,0.57191197463259,0,0,0,1.42156779497018,0,1.20575750823834,0,0,0,0,0,0.239624855491583,0,0,4.1986578933598,0,8.0577433457953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.15354731928,49.0679719192195,128.685170667691,150.761001095622,0,0,0,0,0.368738337083406,29.8879633770205,0,0,0,0,0,0.303127571446259,24.9653159265746,8.76931850656073,54.3356099123121,58.6224737960399,30.8726103876381,33.5724571049937,83.4082815978727,21.8761332755306,31.1677939534481,26.9866964154647,25.0362032691509,17.9037200110104,5.71179872101983,15.2235595782547,0.966875596732978,1.00253235151642,0,1.95184561879831,0.910455840033585,3.40923478894503,0.451199612907412,1.23224539367064,0.784349769176855,0,0.422206515571503,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0.671624264166535,0,0,0,0.656029291399411,0,110.872128532949,0.0915694648183434,0,1.72279661398852,0,12.8547143875328,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0,0,0,0,0.127612712494584,0,9.761756535243,226.0352650244,4.1822236209636,0,0.532306030317022,8.69932992075073,0,0.715624433709956,0,0,0,1.79128453917934,0,1.27281299170375,0.78494864019923,1.2591072030832,1.09814811894422,0.824686816419805,0.606547444719948,0,0,0,0,0,13.7864910522066,4.52497382251881,0,1.10273068709225,2.65375590096488,3.5076070820301,0.578775534266688,0,0,0,0,0.143411352204052,0.491245205065606,0,1.77380532035299,2.74439925886963,1.64647446479951,0,0.349934720244983,0,0,0,111.089684916599,2.58303223602738,1.68471475667626,2.21715076768338,5.51336160496703,0,0,0,0,0,0,0,0,26.7060177818683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94476513822446,6.20735660317994,30.8843268065944,0.921482106297696,0,0,0,0,0,0,0,0,4.49982203009481,0,18.6623752597084,0,0.179021174675609,0,0,0,6.66821940867821,0,0,0,0,0,0,0,0,58.6241450784482,0,0,0,0,0,0,0,0,0,0,7.38945844676597,0,0.91153644677601,0,0,0.325942115766024,34.1331240913154,151.96040745369,82.0873555068697,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,109.694600291307,0,39.2128154035286,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,8.94618256071114,0,1.35904206073614,2.09205692624666,0.305994652908965,0,0,0,0,1.28929632425987,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.394028536495991,0,0,0,2.30298236783334,0,0,0,0,1.72844298240254,0.653174720218818,0,0,45.663989838493,1.92630555584214,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,10.5170989431251,1.66441758450784,0.378806010550178,1.0062716070103,0,2.28840068396924,0,0.466311601748341,0.443565449968902,0.796483835818512,0.899606224327209,1.39736661188633,1.24411862352257,2.39257543102195,2.60872530905867,0,0.380805212168795,0,1.63663793282303,0,50.1156460668773,3.18476710958893,2.00013882331577,13.3924325021289,17.5109734158278,0,3.85239660814607,0,0,5.44094221229454,5.55653938377201,10.5236782937781,184.282417472851,1.54400723580486,3.94711289241673,56.1871484107902,5.59450710985653,56.4267751781263,0,22.1075418707967,9.11579868532147,0,0,0,0,0,0,0.211312123358627,0,0,0,1.13503190713367,0,0,0.622077260032973,0,0,0,0.218419276384028,0,0,0,0,20.3522784418188,0,0,2.1160556621441,20.8246924600176,0,0,0,0,0,0,0,0,0,0,0.366857197043358,4.2744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|phase1_expression=7.26713517082227,3.21150785836475,6.20199378022273,21.0153926541574,2.68176656656373,20.9361245784089,0,0,0,0,0,11.358951350769,10.0231451726812,0,0,1.34465029290355,1.80808358407193,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54565432660823,21.4502872917414,14.9155042789383,2.83734705758686,1.68203280042692,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,22.572054288359,21.5122228472344,0,0,0.505008341862199,0,0.554128230968366,14.9252391099485,23.2930724807255,3.00476117813194,0,264.420323005383,247.51301364072,227.40292994421,212.464496027757,120.15924909202,102.283294398115,92.3139607404685,205.738349002104,156.483830288885,79.264205112652,63.1462304686173,47.3622946479119,312.053431822104,123.925080819998,53.9202683547351,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,19.0390850493111,8.66255378003503,0.118306800039844,0,0.482022059766964,0.330881918197182,0,0,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,2.21379189377604,0.514703430895577,0.658501712451753,0,0,0,4.56131627434455,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,7.49870671894216,7.72717789714754,0.708875486211932,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,5.05282421511254,7.28052058379563,0,0,0,0.57191197463259,0,0,0,1.42156779497018,0,1.20575750823834,0,0,0,0,0,0.239624855491583,0,0,4.1986578933598,0,8.0577433457953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.15354731928,49.0679719192195,128.685170667691,150.761001095622,0,0,0,0,0.368738337083406,29.8879633770205,0,0,0,0,0,0.303127571446259,24.9653159265746,8.76931850656073,54.3356099123121,58.6224737960399,30.8726103876381,33.5724571049937,83.4082815978727,21.8761332755306,31.1677939534481,26.9866964154647,25.0362032691509,17.9037200110104,5.71179872101983,15.2235595782547,0.966875596732978,1.00253235151642,0,1.95184561879831,0.910455840033585,3.40923478894503,0.451199612907412,1.23224539367064,0.784349769176855,0,0.422206515571503,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0.671624264166535,0,0,0,0.656029291399411,0,110.872128532949,0.0915694648183434,0,1.72279661398852,0,12.8547143875328,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0,0,0,0,0.127612712494584,0,9.761756535243,226.0352650244,4.1822236209636,0,0.532306030317022,8.69932992075073,0,0.715624433709956,0,0,0,1.79128453917934,0,1.27281299170375,0.78494864019923,1.2591072030832,1.09814811894422,0.824686816419805,0.606547444719948,0,0,0,0,0,13.7864910522066,4.52497382251881,0,1.10273068709225,2.65375590096488,3.5076070820301,0.578775534266688,0,0,0,0,0.143411352204052,0.491245205065606,0,1.77380532035299,2.74439925886963,1.64647446479951,0,0.349934720244983,0,0,0,111.089684916599,2.58303223602738,1.68471475667626,2.21715076768338,5.51336160496703,0,0,0,0,0,0,0,0,26.7060177818683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94476513822446,6.20735660317994,30.8843268065944,0.921482106297696,0,0,0,0,0,0,0,0,4.49982203009481,0,18.6623752597084,0,0.179021174675609,0,0,0,6.66821940867821,0,0,0,0,0,0,0,0,58.6241450784482,0,0,0,0,0,0,0,0,0,0,7.38945844676597,0,0.91153644677601,0,0,0.325942115766024,34.1331240913154,151.96040745369,82.0873555068697,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,109.694600291307,0,39.2128154035286,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,8.94618256071114,0,1.35904206073614,2.09205692624666,0.305994652908965,0,0,0,0,1.28929632425987,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.394028536495991,0,0,0,2.30298236783334,0,0,0,0,1.72844298240254,0.653174720218818,0,0,45.663989838493,1.92630555584214,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,10.5170989431251,1.66441758450784,0.378806010550178,1.0062716070103,0,2.28840068396924,0,0.466311601748341,0.443565449968902,0.796483835818512,0.899606224327209,1.39736661188633,1.24411862352257,2.39257543102195,2.60872530905867,0,0.380805212168795,0,1.63663793282303,0,50.1156460668773,3.18476710958893,2.00013882331577,13.3924325021289,17.5109734158278,0,3.85239660814607,0,0,5.44094221229454,5.55653938377201,10.5236782937781,184.282417472851,1.54400723580486,3.94711289241673,56.1871484107902,5.59450710985653,56.4267751781263,0,22.1075418707967,9.11579868532147,0,0,0,0,0,0,0.211312123358627,0,0,0,1.13503190713367,0,0,0.622077260032973,0,0,0,0.218419276384028,0,0,0,0,20.3522784418188,0,0,2.1160556621441,20.8246924600176,0,0,0,0,0,0,0,0,0,0,0.366857197043358,4.2744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| ||
|short_description=p1@PSG5 | |short_description=p1@PSG5 | ||
}} | }} |
Latest revision as of 10:32, 18 September 2015
Short description: | p1@PSG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSG5_5end |
Coexpression cluster: | C3801_placenta_Fibroblast_Smooth_mesothelioma_chorionic_Olfactory_epidermoid |
Association with transcript: | 0bp_to_ENST00000366175, NM_001130014, NM_002781, uc002ovu.2, uc002ovv.2, uc002ovw.2, uc002ovx.2_5end |
EntrezGene: | PSG5 |
HGNC: | 9522 |
UniProt: | Q15238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.62e-24 | 76 |
preadipocyte | 7.66e-16 | 12 |
skin fibroblast | 3.97e-14 | 23 |
mesothelial cell | 2.25e-10 | 19 |
extraembryonic cell | 9.59e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.43e-12 | 14 |
membranous layer | 1.43e-12 | 14 |
integument | 7.90e-12 | 46 |
integumental system | 7.90e-12 | 46 |
skin of body | 1.89e-11 | 41 |
organ component layer | 2.24e-11 | 66 |
surface structure | 6.93e-10 | 99 |
omentum | 3.42e-08 | 6 |
peritoneum | 3.42e-08 | 6 |
abdominal cavity | 3.42e-08 | 6 |
visceral peritoneum | 3.42e-08 | 6 |
chorion | 9.87e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.65e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.41e-09 | 5 |
myotonic disease | 8.41e-09 | 5 |
muscle tissue disease | 8.41e-09 | 5 |
myopathy | 8.41e-09 | 5 |
muscular disease | 8.41e-09 | 5 |
myotonic dystrophy | 8.41e-09 | 5 |