FFCP PHASE1:Hg19::chr3:46395344..46395359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=729230 | |EntrezGene=729230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1603 | |HGNC=1603 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000465202_5end | |association_with_transcript=0bp_to_ENST00000465202_5end | ||
|cluster_id=chr3:46395344..46395359,+ | |||
|coexpression_cluster_id=C300 | |coexpression_cluster_id=C300 | ||
|description=CAGE_peak_2_at_CCR2_5end | |description=CAGE_peak_2_at_CCR2_5end | ||
|id=chr3:46395344..46395359,+ | |id=chr3:46395344..46395359,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.90e-21!140;CL:0002087!4.74e-19!119;CL:0000037!8.19e-19!172;CL:0000566!8.19e-19!172;CL:0000542!2.04e-18!53;CL:0000051!2.04e-18!53;CL:0000838!1.43e-17!52;CL:0000988!1.11e-16!182;CL:0002032!2.11e-16!165;CL:0000837!2.11e-16!165;CL:0002031!4.67e-15!124;CL:0000791!7.68e-15!18;CL:0000789!7.68e-15!18;CL:0002420!7.68e-15!18;CL:0002419!7.68e-15!18;CL:0000790!7.68e-15!18;CL:0000625!2.49e-14!11;CL:0000236!4.41e-11!14;CL:0000084!1.09e-10!25;CL:0000827!1.09e-10!25;CL:0000945!1.99e-07!24;CL:0000826!1.99e-07!24 | |ontology_enrichment_celltype=CL:0000738!1.90e-21!140;CL:0002087!4.74e-19!119;CL:0000037!8.19e-19!172;CL:0000566!8.19e-19!172;CL:0000542!2.04e-18!53;CL:0000051!2.04e-18!53;CL:0000838!1.43e-17!52;CL:0000988!1.11e-16!182;CL:0002032!2.11e-16!165;CL:0000837!2.11e-16!165;CL:0002031!4.67e-15!124;CL:0000791!7.68e-15!18;CL:0000789!7.68e-15!18;CL:0002420!7.68e-15!18;CL:0002419!7.68e-15!18;CL:0000790!7.68e-15!18;CL:0000625!2.49e-14!11;CL:0000236!4.41e-11!14;CL:0000084!1.09e-10!25;CL:0000827!1.09e-10!25;CL:0000945!1.99e-07!24;CL:0000826!1.99e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.07e-15;18!CL:0000789;8.07e-15;18!CL:0002419;8.07e-15;18!CL:0000236;2.65e-14;13!CL:0000625;5.48e-14;11!CL:0000542;3.76e-12;53!CL:0000945;2.17e-10;24!CL:0000084;5.87e-10;25!CL:0000784;8.97e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.96e-19,53;CL:0000051,8.96e-19,53;CL:0000838,1.47e-17,52;CL:0000236,3.64e-16,14;CL:0000791,8.44e-15,18;CL:0000789,8.44e-15,18;CL:0002420,8.44e-15,18;CL:0002419,8.44e-15,18;CL:0000790,8.44e-15,18;CL:0000625,5.21e-14,11;CL:0002087,6.04e-13,115;CL:0000738,2.09e-12,136;CL:0000037,1.49e-11,168;CL:0002031,3.60e-11,120;CL:0002032,8.16e-11,161;CL:0000837,8.16e-11,161;CL:0000988,1.75e-10,177;CL:0000945,2.30e-10,24;CL:0000826,2.30e-10,24;CL:0000084,6.05e-10,25;CL:0000827,6.05e-10,25;CL:0000784,8.25e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;8.07e-15;18!CL:0000051;3.76e-12;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.75e-24!115;UBERON:0000178!1.13e-11!15;UBERON:0000179!1.13e-11!15;UBERON:0000463!1.13e-11!15;UBERON:0002390!4.87e-08!102;UBERON:0003061!4.87e-08!102;UBERON:0002193!9.57e-08!112 | |ontology_enrichment_uberon=UBERON:0007023!8.75e-24!115;UBERON:0000178!1.13e-11!15;UBERON:0000179!1.13e-11!15;UBERON:0000463!1.13e-11!15;UBERON:0002390!4.87e-08!102;UBERON:0003061!4.87e-08!102;UBERON:0002193!9.57e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.86e-12;15!UBERON:0000179;3.86e-12;15!UBERON:0000463;3.86e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.36e-12,15;UBERON:0000179,3.36e-12,15;UBERON:0000463,3.36e-12,15;UBERON:0007023,6.58e-11,114 | |||
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| ||
|short_description=p2@CCR2 | |short_description=p2@CCR2 | ||
}} | }} |
Latest revision as of 10:36, 18 September 2015
Short description: | p2@CCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCR2_5end |
Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
Association with transcript: | 0bp_to_ENST00000465202_5end |
EntrezGene: | CCR2 |
HGNC: | 1603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.96e-19 | 53 |
common lymphoid progenitor | 8.96e-19 | 53 |
lymphoid lineage restricted progenitor cell | 1.47e-17 | 52 |
B cell | 3.64e-16 | 14 |
mature alpha-beta T cell | 8.44e-15 | 18 |
alpha-beta T cell | 8.44e-15 | 18 |
immature T cell | 8.44e-15 | 18 |
mature T cell | 8.44e-15 | 18 |
immature alpha-beta T cell | 8.44e-15 | 18 |
CD8-positive, alpha-beta T cell | 5.21e-14 | 11 |
nongranular leukocyte | 6.04e-13 | 115 |
leukocyte | 2.09e-12 | 136 |
hematopoietic stem cell | 1.49e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 3.60e-11 | 120 |
hematopoietic oligopotent progenitor cell | 8.16e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.16e-11 | 161 |
hematopoietic cell | 1.75e-10 | 177 |
lymphocyte of B lineage | 2.30e-10 | 24 |
pro-B cell | 2.30e-10 | 24 |
T cell | 6.05e-10 | 25 |
pro-T cell | 6.05e-10 | 25 |
plasmacytoid dendritic cell | 8.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.36e-12 | 15 |
haemolymphatic fluid | 3.36e-12 | 15 |
organism substance | 3.36e-12 | 15 |
adult organism | 6.58e-11 | 114 |