FFCP PHASE1:Hg19::chr12:46765044..46765060,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:46765044..46765060,-
|short_description=p6@SLC38A2
|description=CAGE_peak_6_at_SLC38A2_5end
|association_with_transcript=155bp_to_ENST00000547252_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54407 | |EntrezGene=54407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13448 | |HGNC=13448 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=155bp_to_ENST00000547252_5end | |||
|cluster_id=chr12:46765044..46765060,- | |||
|description=CAGE_peak_6_at_SLC38A2_5end | |||
|id=chr12:46765044..46765060,- | |||
|ontology_enrichment_celltype=CL:0000548!2.09e-10!679;CL:0000004!2.09e-10!679;CL:0000255!2.09e-10!679;CL:0000012!6.18e-10!682;CL:0000223!4.52e-07!59;CL:0000063!5.00e-07!578;CL:0000144!5.36e-07!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,3.33e-07,433;CL:0000048,6.91e-07,427;CL:0000034,7.35e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.63e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.23e-08;9!UBERON:0000042;2.23e-08;9!UBERON:0003688;7.32e-07;6!UBERON:0002358;7.32e-07;6!UBERON:0003684;7.32e-07;6!UBERON:0001178;7.32e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.57e-09,99 | |||
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| ||
|short_description=p6@SLC38A2 | |||
}} | }} |
Latest revision as of 11:08, 18 September 2015
Short description: | p6@SLC38A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC38A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 155bp_to_ENST00000547252_5end |
EntrezGene: | SLC38A2 |
HGNC: | 13448 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 3.33e-07 | 433 |
multi fate stem cell | 6.91e-07 | 427 |
stem cell | 7.35e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.57e-09 | 99 |