FFCP PHASE1:Hg19::chr19:44008869..44008882,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=653583 | |EntrezGene=653583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30499 | |HGNC=30499 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NSJ2,Q96HZ0 | |UniProt=Q6NSJ2,Q96HZ0 | ||
|association_with_transcript=102bp_to_NM_198850,uc002own.3,uc002owo.2_5end | |association_with_transcript=102bp_to_NM_198850,uc002own.3,uc002owo.2_5end | ||
|cluster_id=chr19:44008869..44008882,- | |||
|description=CAGE_peak_3_at_PHLDB3_5end | |description=CAGE_peak_3_at_PHLDB3_5end | ||
|id=chr19:44008869..44008882,- | |id=chr19:44008869..44008882,- | ||
|ontology_enrichment_celltype=CL:0000066!3.57e-08!254 | |ontology_enrichment_celltype=CL:0000066!3.57e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000624;4.69e-16;6!CL:0000791;1.63e-09;18!CL:0000789;1.63e-09;18!CL:0002419;1.63e-09;18!CL:0000123;2.79e-09;2!CL:0000242;2.79e-09;2!CL:0001014;5.18e-09;2!CL:0001016;5.18e-09;2!CL:0000815;6.56e-09;2!CL:0000792;6.56e-09;2!CL:0002677;6.56e-09;2!CL:0000575;2.05e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.97e-16,6;CL:0000791,2.14e-09,18;CL:0000789,2.14e-09,18;CL:0002420,2.14e-09,18;CL:0002419,2.14e-09,18;CL:0000790,2.14e-09,18;CL:0000242,2.92e-09,2;CL:0001014,3.43e-09,2;CL:0001016,3.43e-09,2;CL:0000815,5.75e-09,2;CL:0000792,5.75e-09,2;CL:0002677,5.75e-09,2;CL:0000575,1.99e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.63e-09;18 | |||
|ontology_enrichment_disease=DOID:305!4.24e-11!106;DOID:0050687!4.11e-10!143;DOID:299!1.96e-07!25 | |ontology_enrichment_disease=DOID:305!4.24e-11!106;DOID:0050687!4.11e-10!143;DOID:299!1.96e-07!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.05e-07!169;UBERON:0000925!6.05e-07!169;UBERON:0006595!6.05e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,1.20538905604795,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0.152826811495903,0,0,0,0.767658796194425,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0.434021741431704,0,0,0,0,0.755751887377619,0.242584061187816,0,0,0,0,0,0,0,0.645484683583826,1.35426486594342,0,0,0.449446968890169,0,0.641858054152187,1.27867425159808,0,0,0,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0,0,0,0.560508562981536,0,1.37696839079683,1.17903228824749,2.67281948699362,0.334372990781356,4.23698946623668,0.473447805734733,0,0.222820913770347,1.47302953737419,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,1.03800594213442,0.535081656179426,2.09071047609954,0.113309342697566,0,0.68725489096526,0.506039384039006,0.637130828648193,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0,1.00803371612366,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,1.85392221392215,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0.265059536642971,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,1.22988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0.433099343283221,0.462985512576611,0.951270761172991,3.95102198979638,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0.432359860250884,0.6312121671319,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,1.2942852049117,1.49418580924822,1.81876542867756,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.288666338176536,0.670302275535787,0,0.188287601553558,0.43050537267123,0,1.33029046061003,0.229723400206959,0,0,0,0.952927101831156,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0,0,0.853702120180969,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,2.14870036263921,0.296964680832639,5.52889263778618,0,0.140669416410513,0.111308705022906,0,0,0,0.276283915531148,1.0077309914171,0,0.123084805461069,0,0.539210106883961,0,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0.524759999977174,0.724999575434793,0,0.254253650292766,1.65471377237555,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0.544692317594951,4.87983104975112,0.307801034015188,0.113942055847001,0,0,0.325942115766024,0.31900115973192,0.549585560411174,1.5991043280559,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0.421996129056054,0.489698424477443,0.565412285735763,0.216388639742091,0,0.265372693510018,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0.978323094660449,0,0.789168805698781,0,0,0,0.300646838828985,0,0,0,0,0,1.99226682220855,0.277349346026277,0.867798691675654,0.685946781900644,0.957651272384428,0,0,0,0,0,4.36450574197887,0.441280633457501,0,0,0.19871461170299,0,1.75996244461323,0.160317640503067,0,0,0,0.229073192331831,1.88754497648161,0,0,0.942776138467182,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,1.99679000498991,0.429226048136571,0,0.201550417460179,0,0,0.393915911536118,0.164831716762333,0.202210631562555,0.0984274815147488,0,0,0.136203406111576,0,0,0,1.799791132412,7.7380195455795,0.0607495566580247,0,0.630445658393585,0.419636705079985,0.316801009558219,0.179287339332845,5.56554072226391,0,0,0,0,0,0,1.19730191562487,0.410462603746695,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0.13223260174269,0.171086837884329,2.11444506695002,0,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0.638341257770182,0,0,0.306345576763462,0.327872630709804,1.88464915500281,0,0,0,0,0,0,0,0.249960815924213,0,0,0,4.21501415226193,2.3187364577732,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0.428883182749851,0,0,0.694567422971502,0,0.179088841081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| 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| ||
|short_description=p3@PHLDB3 | |short_description=p3@PHLDB3 | ||
}} | }} |
Latest revision as of 11:10, 18 September 2015
Short description: | p3@PHLDB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHLDB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_NM_198850, uc002own.3, uc002owo.2_5end |
EntrezGene: | PHLDB3 |
HGNC: | 30499 |
UniProt: | Q6NSJ2Q96HZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.97e-16 | 6 |
mature alpha-beta T cell | 2.14e-09 | 18 |
alpha-beta T cell | 2.14e-09 | 18 |
immature T cell | 2.14e-09 | 18 |
mature T cell | 2.14e-09 | 18 |
immature alpha-beta T cell | 2.14e-09 | 18 |
Merkel cell | 2.92e-09 | 2 |
CD1a-positive Langerhans cell | 3.43e-09 | 2 |
immature CD1a-positive Langerhans cell | 3.43e-09 | 2 |
regulatory T cell | 5.75e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.75e-09 | 2 |
naive regulatory T cell | 5.75e-09 | 2 |
corneal epithelial cell | 1.99e-08 | 2 |