FFCP PHASE1:Hg19::chr1:51701673..51701698,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:51701673..51701698,+
|short_description=p13@RNF11
|description=CAGE_peak_13_at_RNF11_5end
|association_with_transcript=-244bp_to_ENST00000242719_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26994 | |EntrezGene=26994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10056 | |HGNC=10056 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3C5 | |UniProt=Q9Y3C5 | ||
|association_with_transcript=-244bp_to_ENST00000242719_5end | |||
|cluster_id=chr1:51701673..51701698,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_13_at_RNF11_5end | |||
|id=chr1:51701673..51701698,+ | |||
|ontology_enrichment_celltype=CL:0002031!6.52e-11!124;CL:0000557!1.10e-10!71;CL:0000860!4.31e-10!45;CL:0002057!7.70e-10!42;CL:0000839!9.82e-10!70;CL:0000738!1.94e-09!140;CL:0000037!1.21e-08!172;CL:0000566!1.21e-08!172;CL:0002274!1.24e-08!5;CL:0000457!1.24e-08!5;CL:0002191!1.24e-08!5;CL:0000097!1.24e-08!5;CL:0000831!1.24e-08!5;CL:0002028!1.24e-08!5;CL:0000766!1.44e-08!76;CL:0002032!5.00e-08!165;CL:0000837!5.00e-08!165;CL:0000988!1.14e-07!182;CL:0000623!2.09e-07!3;CL:0000825!2.09e-07!3;CL:0002009!2.11e-07!65;CL:0000763!2.18e-07!112;CL:0000049!2.18e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.18e-105;5!CL:0000163;8.65e-59;9!CL:0001014;7.67e-18;2!CL:0001016;7.67e-18;2!CL:0000151;3.46e-15;36!CL:0000453;6.13e-08;5!CL:0000840;8.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.18e-105,5;CL:0002028,5.18e-105,5;CL:0000163,8.65e-59,9;CL:0001014,7.67e-18,2;CL:0001016,7.67e-18,2;CL:0000151,2.86e-15,36;CL:0000557,1.26e-12,67;CL:0000839,1.82e-08,66;CL:0000763,4.95e-08,108;CL:0000049,4.95e-08,108;CL:0000453,6.13e-08,5;CL:0000766,8.24e-08,72;CL:0002031,2.87e-07,120;CL:0000840,8.02e-07,5;CL:0001029,8.02e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.11e-10!80;UBERON:0001474!1.28e-09!86;UBERON:0004765!4.93e-08!101;UBERON:0001434!4.93e-08!101;UBERON:0002390!7.42e-08!102;UBERON:0003061!7.42e-08!102;UBERON:0002193!2.37e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.34e-11,76;UBERON:0001474,2.00e-10,82;UBERON:0004765,1.52e-09,90;UBERON:0002405,2.97e-09,93;UBERON:0002390,8.34e-09,98;UBERON:0003061,8.34e-09,98;UBERON:0001434,1.22e-08,100;UBERON:0002193,4.95e-08,108 | |||
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| ||
|short_description=p13@RNF11 | |||
}} | }} |
Latest revision as of 11:20, 18 September 2015
Short description: | p13@RNF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RNF11_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -244bp_to_ENST00000242719_5end |
EntrezGene: | RNF11 |
HGNC: | 10056 |
UniProt: | Q9Y3C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.18e-105 | 5 |
basophil mast progenitor cell | 5.18e-105 | 5 |
endocrine cell | 8.65e-59 | 9 |
CD1a-positive Langerhans cell | 7.67e-18 | 2 |
immature CD1a-positive Langerhans cell | 7.67e-18 | 2 |
secretory cell | 2.86e-15 | 36 |
granulocyte monocyte progenitor cell | 1.26e-12 | 67 |
myeloid lineage restricted progenitor cell | 1.82e-08 | 66 |
myeloid cell | 4.95e-08 | 108 |
common myeloid progenitor | 4.95e-08 | 108 |
Langerhans cell | 6.13e-08 | 5 |
myeloid leukocyte | 8.24e-08 | 72 |
hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
immature conventional dendritic cell | 8.02e-07 | 5 |
common dendritic progenitor | 8.02e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.34e-11 | 76 |
bone element | 2.00e-10 | 82 |
skeletal element | 1.52e-09 | 90 |
immune system | 2.97e-09 | 93 |
hematopoietic system | 8.34e-09 | 98 |
blood island | 8.34e-09 | 98 |
skeletal system | 1.22e-08 | 100 |
hemolymphoid system | 4.95e-08 | 108 |