FFCP PHASE1:Hg19::chr10:52833525..52833538,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5592 | |EntrezGene=5592 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9414 | |HGNC=9414 | ||
|TSSclassifier=strong | |||
|UniProt=Q13976 | |UniProt=Q13976 | ||
|association_with_transcript=-395bp_to_ENST00000373980_5end | |association_with_transcript=-395bp_to_ENST00000373980_5end | ||
|cluster_id=chr10:52833525..52833538,+ | |||
|description=CAGE_peak_8_at_PRKG1_5end | |description=CAGE_peak_8_at_PRKG1_5end | ||
|id=chr10:52833525..52833538,+ | |id=chr10:52833525..52833538,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.26e-07;1 | |ontology_enrichment_celltype_v019=CL:0000222;1.26e-07;1 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.09e-08;1!UBERON:0004874;3.43e-08;1!UBERON:0010115;4.66e-08;1!UBERON:0006298;1.26e-07;1 | |ontology_enrichment_development_v019=UBERON:0000358;3.09e-08;1!UBERON:0004874;3.43e-08;1!UBERON:0010115;4.66e-08;1!UBERON:0006298;1.26e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;1.26e-07;1 | |ontology_enrichment_disease_v019=DOID:3347;1.26e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3347,1.11e-07,1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;2.40e-09;3!UBERON:0005382;2.40e-09;3!UBERON:0009663;1.19e-08;7!UBERON:0002146;2.79e-08;1!UBERON:0005623;2.79e-08;1!UBERON:0006834;3.43e-08;1!UBERON:0000989;3.43e-08;1!UBERON:0008811;3.43e-08;1!UBERON:0002363;4.66e-08;1!UBERON:0005795;6.30e-08;1!UBERON:0007029;6.30e-08;1!UBERON:0000922;9.17e-08;49!UBERON:0001874;1.26e-07;1!UBERON:0001736;1.26e-07;1!UBERON:0000369;3.23e-07;4!UBERON:0002435;3.23e-07;4!UBERON:0000204;3.23e-07;4!UBERON:0002420;7.88e-07;9!UBERON:0000125;7.88e-07;9!UBERON:0007245;7.88e-07;9!UBERON:0002308;7.88e-07;9!UBERON:0010009;7.88e-07;9!UBERON:0010011;7.88e-07;9!UBERON:0000454;7.88e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0005383;2.40e-09;3!UBERON:0005382;2.40e-09;3!UBERON:0009663;1.19e-08;7!UBERON:0002146;2.79e-08;1!UBERON:0005623;2.79e-08;1!UBERON:0006834;3.43e-08;1!UBERON:0000989;3.43e-08;1!UBERON:0008811;3.43e-08;1!UBERON:0002363;4.66e-08;1!UBERON:0005795;6.30e-08;1!UBERON:0007029;6.30e-08;1!UBERON:0000922;9.17e-08;49!UBERON:0001874;1.26e-07;1!UBERON:0001736;1.26e-07;1!UBERON:0000369;3.23e-07;4!UBERON:0002435;3.23e-07;4!UBERON:0000204;3.23e-07;4!UBERON:0002420;7.88e-07;9!UBERON:0000125;7.88e-07;9!UBERON:0007245;7.88e-07;9!UBERON:0002308;7.88e-07;9!UBERON:0010009;7.88e-07;9!UBERON:0010011;7.88e-07;9!UBERON:0000454;7.88e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.78e-09,3;UBERON:0005382,1.78e-09,3;UBERON:0009663,1.13e-08,7;UBERON:0002146,2.70e-08,1;UBERON:0005623,2.70e-08,1;UBERON:0000989,3.32e-08,1;UBERON:0008811,3.32e-08,1;UBERON:0006258,3.32e-08,1;UBERON:0005876,3.32e-08,1;UBERON:0004874,3.32e-08,1;UBERON:0006834,3.55e-08,1;UBERON:0002363,4.99e-08,1;UBERON:0007645,4.99e-08,1;UBERON:0007647,4.99e-08,1;UBERON:0010115,4.99e-08,1;UBERON:0007029,6.10e-08,1;UBERON:0001874,1.04e-07,1;UBERON:0001736,1.18e-07,1;UBERON:0006298,1.18e-07,1;UBERON:0000369,2.58e-07,4;UBERON:0002435,2.58e-07,4;UBERON:0000204,2.58e-07,4;UBERON:0010082,2.58e-07,4;UBERON:0002420,7.57e-07,9;UBERON:0000125,7.57e-07,9;UBERON:0007245,7.57e-07,9;UBERON:0002308,7.57e-07,9;UBERON:0010009,7.57e-07,9;UBERON:0010011,7.57e-07,9;UBERON:0000454,7.57e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.351339142772504,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,1.12135520028461,0,0,0.622422070799533,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0.358779271377724,0.427114777637135,0,0,0.515262646192195,0.515281080091258,0.37223371266318,0,0,0,0.276149695926898,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0.310983165046111,0.252320850875628,0.36497735907583,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0.315404830067869,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.462145851343933,0,0,0.214840489736547,0.145016693914229,0,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0,8.567663494796,0.552567831062295,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.371072392647405,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,1.4471572635049,0,0,0,0.438770794307945,0,0,4.38616473471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.50377859655677,0.611030144933625,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,3.09614240179591,0.901940516486955,0.207376382794494,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,0,0,0,0.316553979779393,0,0.160317640503067,0.85381197895741,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,1.20084057741958,0.821432273351958,0,0,0,0.837847203816763,8.93725653645566,0.717873024576814,0.599037001496973,0.429226048136571,0.446342914883745,0.671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.643012593860077,0.550157746388935,0.415440338029185,0,0,0.485996453264197,0,0.0788057072991982,0.209818352539992,0.105600336519406,0.179287339332845,0,0,0.662091970365432,0,0,0,0.653174720218818,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0.732157589411779,0.1251909307065,0,0.110929051536852,0.310482014706917,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.553033744606923,0,0,0,0,0.737318726261158,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0.352675943690684,0.6124909547064,0.385375350578757,0,0.798169295285756,0,0.252071696221718,0.138314504928436,0.484426936895553,0,0,0,0,0,0,1.3807198521202,0,0.676892955143315,0,0,0,0.49131575253029,0,0.135075169236789,0,0.413373593002368,0.253663240775627,0,0,5.95453414067153,1.93458368795583,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0.339848664884159,0.197318320688547,0,0.444925607568277,0.706437835654626,1.41404030924402,0,4.56579360254748,0,0,0.142953088353313,0,0,2.26015753993353,0,0,0,0,0.860454717640555,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,3.4794432940146,2.4285549652957,0,0,0,0,0,0,0.154348316215889,0.655678681511872,0,0.735444965261716,0,0.196308467114945,1.18818560130834,0,0,0.187967835959707,0.322289439867886,0,0,0,0,2.19100916473955,1.37618785021362,0.573358332605805,0,0.203974470572744,0.436350690340377,3.1741610430924,0,0,0.432626562123789,0,0,0,0,0,0,0,0.985123076837112,0.535928260312357,0,0.20686599172379,0.852935927603924,2.14257988317366,0.0645889098360061,0.620747142958579,0.224263725161227,0.0636471582781649,0.404234377916439,0.653150243690884,0.684466602170562,0.26940821205835,0.215166616178029,1.66330178273007,0,0.960546112899439,0,0,7.03922827210363,5.50086498822899,2.44137706989443,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.351339142772504,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,1.12135520028461,0,0,0.622422070799533,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0.358779271377724,0.427114777637135,0,0,0.515262646192195,0.515281080091258,0.37223371266318,0,0,0,0.276149695926898,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0.310983165046111,0.252320850875628,0.36497735907583,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0.315404830067869,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.462145851343933,0,0,0.214840489736547,0.145016693914229,0,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0,8.567663494796,0.552567831062295,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.371072392647405,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,1.4471572635049,0,0,0,0.438770794307945,0,0,4.38616473471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.50377859655677,0.611030144933625,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,3.09614240179591,0.901940516486955,0.207376382794494,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,0,0,0,0.316553979779393,0,0.160317640503067,0.85381197895741,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,1.20084057741958,0.821432273351958,0,0,0,0.837847203816763,8.93725653645566,0.717873024576814,0.599037001496973,0.429226048136571,0.446342914883745,0.671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.643012593860077,0.550157746388935,0.415440338029185,0,0,0.485996453264197,0,0.0788057072991982,0.209818352539992,0.105600336519406,0.179287339332845,0,0,0.662091970365432,0,0,0,0.653174720218818,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0.732157589411779,0.1251909307065,0,0.110929051536852,0.310482014706917,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.553033744606923,0,0,0,0,0.737318726261158,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0.352675943690684,0.6124909547064,0.385375350578757,0,0.798169295285756,0,0.252071696221718,0.138314504928436,0.484426936895553,0,0,0,0,0,0,1.3807198521202,0,0.676892955143315,0,0,0,0.49131575253029,0,0.135075169236789,0,0.413373593002368,0.253663240775627,0,0,5.95453414067153,1.93458368795583,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0.339848664884159,0.197318320688547,0,0.444925607568277,0.706437835654626,1.41404030924402,0,4.56579360254748,0,0,0.142953088353313,0,0,2.26015753993353,0,0,0,0,0.860454717640555,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,3.4794432940146,2.4285549652957,0,0,0,0,0,0,0.154348316215889,0.655678681511872,0,0.735444965261716,0,0.196308467114945,1.18818560130834,0,0,0.187967835959707,0.322289439867886,0,0,0,0,2.19100916473955,1.37618785021362,0.573358332605805,0,0.203974470572744,0.436350690340377,3.1741610430924,0,0,0.432626562123789,0,0,0,0,0,0,0,0.985123076837112,0.535928260312357,0,0.20686599172379,0.852935927603924,2.14257988317366,0.0645889098360061,0.620747142958579,0.224263725161227,0.0636471582781649,0.404234377916439,0.653150243690884,0.684466602170562,0.26940821205835,0.215166616178029,1.66330178273007,0,0.960546112899439,0,0,7.03922827210363,5.50086498822899,2.44137706989443,0,0.402547587182052,0 | ||
|short_description=p8@PRKG1 | |short_description=p8@PRKG1 | ||
}} | }} |
Latest revision as of 11:32, 18 September 2015
Short description: | p8@PRKG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PRKG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -395bp_to_ENST00000373980_5end |
EntrezGene: | PRKG1 |
HGNC: | 9414 |
UniProt: | Q13976 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 1.78e-09 | 3 |
dorsal striatum | 1.78e-09 | 3 |
telencephalic nucleus | 1.13e-08 | 7 |
pulmonary valve | 2.70e-08 | 1 |
semi-lunar valve | 2.70e-08 | 1 |
penis | 3.32e-08 | 1 |
intromittent organ | 3.32e-08 | 1 |
lateral plate mesenchyme | 3.32e-08 | 1 |
undifferentiated genital tubercle | 3.32e-08 | 1 |
somatopleure | 3.32e-08 | 1 |
uterus or analog | 3.55e-08 | 1 |
dura mater | 4.99e-08 | 1 |
future meninx | 4.99e-08 | 1 |
ectomeninx | 4.99e-08 | 1 |
future dura mater | 4.99e-08 | 1 |
surface | 6.10e-08 | 1 |
putamen | 1.04e-07 | 1 |
submandibular gland | 1.18e-07 | 1 |
submandibular gland primordium | 1.18e-07 | 1 |
corpus striatum | 2.58e-07 | 4 |
striatum | 2.58e-07 | 4 |
ventral part of telencephalon | 2.58e-07 | 4 |
future corpus striatum | 2.58e-07 | 4 |
basal ganglion | 7.57e-07 | 9 |
neural nucleus | 7.57e-07 | 9 |
nuclear complex of neuraxis | 7.57e-07 | 9 |
nucleus of brain | 7.57e-07 | 9 |
aggregate regional part of brain | 7.57e-07 | 9 |
collection of basal ganglia | 7.57e-07 | 9 |
cerebral subcortex | 7.57e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.11e-07 | 1 |