FFCP PHASE1:Hg19::chr2:74740569..74740580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3196 | |EntrezGene=3196 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5057 | |HGNC=5057 | ||
|TSSclassifier=strong | |||
|UniProt=F8VSD3 | |UniProt=F8VSD3 | ||
|association_with_transcript=-9bp_to_ENST00000497238_5end | |association_with_transcript=-9bp_to_ENST00000497238_5end | ||
|cluster_id=chr2:74740569..74740580,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_4_at_TLX2_5end | |description=CAGE_peak_4_at_TLX2_5end | ||
|id=chr2:74740569..74740580,+ | |id=chr2:74740569..74740580,+ | ||
|ontology_enrichment_celltype=CL:0000333!2.95e-10!41;CL:0000133!4.05e-07!59 | |ontology_enrichment_celltype=CL:0000333!2.95e-10!41;CL:0000133!4.05e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.56e-45;5!CL:0002321;1.12e-15;15!CL:0000243;8.97e-07;15!CL:0000125;8.97e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.03e-14,41;CL:0000133,1.90e-10,59;CL:0000221,1.20e-08,72;CL:0000243,9.10e-07,15;CL:0000125,9.10e-07,15;CL:0000030,9.10e-07,15;CL:0000339,9.10e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.66e-10;10!UBERON:0003056;1.19e-09;3!CL:0000339;8.97e-07;15 | |||
|ontology_enrichment_disease=DOID:169!6.86e-34!6;DOID:3095!4.91e-27!22;DOID:2994!4.91e-27!22;DOID:171!1.71e-20!10;DOID:0050687!1.74e-07!143;DOID:162!2.76e-07!235;DOID:14566!4.25e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:169;6.30e-38;6!DOID:171;4.10e-23;10!DOID:3095;6.47e-11;22!DOID:2994;6.47e-11;22!DOID:3093;3.20e-09;11!DOID:5409;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.56e-38,6;DOID:171,3.80e-23,10;DOID:3095,6.26e-11,22;DOID:2994,6.26e-11,22;DOID:3093,3.27e-09,11;DOID:5409,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.42e-40!5;UBERON:0002410!1.42e-40!5;UBERON:0000010!9.90e-23!8;UBERON:0000966!5.29e-11!5;UBERON:0005388!5.29e-11!5;UBERON:0001802!5.29e-11!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.56e-45;5!UBERON:0002410;2.56e-45;5!UBERON:0000010;1.38e-25;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.20e-45,5;UBERON:0002410,2.20e-45,5;UBERON:0000010,1.27e-25,8;UBERON:0001016,5.51e-07,89 | |||
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|short_description=p4@TLX2 | |short_description=p4@TLX2 | ||
}} | }} |
Latest revision as of 11:38, 18 September 2015
Short description: | p4@TLX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TLX2_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | -9bp_to_ENST00000497238_5end |
EntrezGene: | TLX2 |
HGNC: | 5057 |
UniProt: | F8VSD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.03e-14 | 41 |
neurectodermal cell | 1.90e-10 | 59 |
ectodermal cell | 1.20e-08 | 72 |
glial cell (sensu Vertebrata) | 9.10e-07 | 15 |
glial cell | 9.10e-07 | 15 |
glioblast | 9.10e-07 | 15 |
glioblast (sensu Vertebrata) | 9.10e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.20e-45 | 5 |
autonomic nervous system | 2.20e-45 | 5 |
peripheral nervous system | 1.27e-25 | 8 |
nervous system | 5.51e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.56e-38 | 6 |
neuroectodermal tumor | 3.80e-23 | 10 |
germ cell and embryonal cancer | 6.26e-11 | 22 |
germ cell cancer | 6.26e-11 | 22 |
nervous system cancer | 3.27e-09 | 11 |
lung small cell carcinoma | 1.69e-07 | 4 |