FFCP PHASE1:Hg19::chr10:54074033..54074050,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=22943 | |EntrezGene=22943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=2891 | |HGNC=2891 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=O94907 | |UniProt=O94907 | ||
|association_with_transcript=0bp_to_NM_012242,uc001jjr.2_5end | |association_with_transcript=0bp_to_NM_012242,uc001jjr.2_5end | ||
|cluster_id=chr10:54074033..54074050,+ | |||
|coexpression_cluster_id=C3025 | |coexpression_cluster_id=C3025 | ||
|description=CAGE_peak_1_at_DKK1_5end | |description=CAGE_peak_1_at_DKK1_5end |
Latest revision as of 12:02, 18 September 2015
Short description: | p1@DKK1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DKK1_5end |
Coexpression cluster: | C3025_Fibroblast_gastric_astrocytoma_glioblastoma_colon_Adipocyte_mesothelioma |
Association with transcript: | 0bp_to_NM_012242, uc001jjr.2_5end |
EntrezGene: | DKK1 |
HGNC: | 2891 |
UniProt: | O94907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@DKK1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.66e-26 | 250 |
mesodermal cell | 1.38e-18 | 121 |
epithelial cell | 2.35e-17 | 253 |
fibroblast | 1.80e-16 | 76 |
squamous epithelial cell | 2.77e-12 | 63 |
skin fibroblast | 4.52e-11 | 23 |
muscle precursor cell | 1.66e-10 | 58 |
myoblast | 1.66e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.66e-10 | 58 |
smooth muscle cell | 4.41e-10 | 43 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
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trunk | 3.99e-15 | 199 |
unilaminar epithelium | 4.05e-15 | 148 |
surface structure | 3.32e-14 | 99 |
vasculature | 1.82e-12 | 78 |
vascular system | 1.82e-12 | 78 |
vessel | 4.27e-12 | 68 |
artery | 4.92e-12 | 42 |
arterial blood vessel | 4.92e-12 | 42 |
arterial system | 4.92e-12 | 42 |
epithelial tube open at both ends | 6.19e-12 | 59 |
Showing 1 to 10 of 44 entries